RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 BLOC1S1P78537 153 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 SAMD10Q9BYL1 202 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 KLF13Q9Y2Y9 288 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-208ENST00000397030 PRELID3BQ9Y3B1 194 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 TSPAN11A1L157 253 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 NUDT19A8MXV4 375 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 SGCEO43556 437 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 CD1CP29017 333 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 NKAIN1Q4KMZ8 207 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 PM20D2Q8IYS1 436 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 PAQR8Q8TEZ7 354 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 NCBP2LA6PVI3 153 aaKnown RBP16.13■□□□□ 0.17
MCF2L-208ENST00000397030 GPR137BO60478 399 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 RANBP10Q6VN20 620 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 PINX1Q96BK5 328 aaKnown RBP16.13■□□□□ 0.17
MCF2L-208ENST00000397030 SMCO4Q9NRQ5 59 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 KIF25Q9UIL4 384 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 HPGDSO60760 199 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 DNAJB6O75190 326 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 KCNK2O95069 426 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 CAMK2BQ13554 666 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 GK2Q14410 553 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-208ENST00000397030 C9orf50Q5SZB4 431 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 CNIH2Q6PI25 160 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 PGAP3Q96FM1 320 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-208ENST00000397030 ARHGEF15O94989 841 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 SRFP11831 508 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 ILKQ13418 452 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 GPR150Q8NGU9 434 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 OR52N5Q8NH56 324 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 KCNJ15Q99712 375 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 OR51B4Q9Y5P0 310 aa16.13■□□□□ 0.17
MCF2L-208ENST00000397030 BCKDHBP21953 392 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 LILRA2Q8N149 483 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 SUMF2Q8NBJ7 301 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 BARHL1Q9BZE3 327 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 BAZ2AQ9UIF9 1905 aaKnown RBP16.12■□□□□ 0.17
MCF2L-208ENST00000397030 TMEM72A0PK05 275 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 TRAF3IP2O43734 574 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-208ENST00000397030 RGS11O94810 467 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 BLVRBP30043 206 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-208ENST00000397030 CSNK1DP48730 415 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 OR7G1Q8NGA0 311 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 ZFP90Q8TF47 636 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 SLC46A1Q96NT5 459 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 SLC5A10A0PJK1 596 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 C5orf49A4QMS7 147 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 SOCS7O14512 581 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 BCL6P41182 706 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 RTL6Q6ICC9 239 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 ADAMTSL4Q6UY14 1074 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 SYT9Q86SS6 491 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 OR51D1Q8NGF3 324 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 LKAAEAR1Q8TD35 194 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 RNF32Q9H0A6 362 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 HSD3B7Q9H2F3 369 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 MSTNO14793 375 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 DPM1O60762 260 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 EIF1P41567 113 aaKnown RBP16.12■□□□□ 0.17
MCF2L-208ENST00000397030 CCL7P80098 99 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 TCTEX1D2Q8WW35 142 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 NT5C3BQ969T7 300 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 TNFRSF13CQ96RJ3 184 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 ATF6BQ99941 703 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 HRH3Q9Y5N1 445 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 SIRPB1O00241 398 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 GLCEO94923 617 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 CYCSP99999 105 aaKnown RBP16.12■□□□□ 0.17
MCF2L-208ENST00000397030 NAA40Q86UY6 237 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 CCDC71Q8IV32 467 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-208ENST00000397030 ZBTB8AQ96BR9 441 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 BORCS6Q96GS4 357 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 TSSK2Q96PF2 358 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 PRRT1Q99946 306 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 MMP17Q9ULZ9 603 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 CACNG2Q9Y698 323 aa16.12■□□□□ 0.17
MCF2L-208ENST00000397030 BOLA2-SMG1P6H3BVE0 249 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 K7ESM1 405 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 TYROBPO43914 113 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 B3GLCTQ6Y288 498 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 FBXO27Q8NI29 283 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 UHRF2Q96PU4 802 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 RTL8AQ9BWD3 113 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 SEMA4CQ9C0C4 833 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 SLC38A1Q9H2H9 487 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 LIN7BQ9HAP6 207 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 PTTG3PQ9NZH4 202 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 H3BMQ9 156 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 SOX18P35713 384 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 PGGHGQ32M88 737 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 GLYR1Q49A26 553 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-208ENST00000397030 KCNIP4Q6PIL6 250 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 FBXL14Q8N1E6 418 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 B3GNT7Q8NFL0 401 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 CPNE4Q96A23 557 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-208ENST00000397030 M0QZ24 198 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 OR2B11Q5JQS5 317 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 C1orf220Q5T0J3 134 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 PDZD9Q8IXQ8 264 aa16.11■□□□□ 0.17
MCF2L-208ENST00000397030 TMEM217Q8N7C4 229 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms