RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 IL20RAQ9UHF4 553 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 TOX3O15405 576 aaPredicted RBP14.45□□□□□ -0.1
GNE-202ENST00000396594 FOXK2Q01167 660 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 SSBP1Q04837 148 aaKnown RBP14.45□□□□□ -0.1
GNE-202ENST00000396594 MADCAM1Q13477 382 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 PEA15Q15121 130 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 LHX8Q68G74 356 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 SLC35D2Q76EJ3 337 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 RNF24Q9Y225 148 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 RPH3AQ9Y2J0 694 aaPredicted RBP14.45□□□□□ -0.1
GNE-202ENST00000396594 ZNF831Q5JPB2 1677 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 TMEM200CA6NKL6 621 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 ZNF593O00488 134 aaPredicted RBP14.45□□□□□ -0.1
GNE-202ENST00000396594 TAS2R30P59541 319 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 SLC46A3Q7Z3Q1 461 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 NANPQ8TBE9 248 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 SLC37A2Q8TED4 501 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 OR52A5Q9H2C5 316 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 CHST11Q9NPF2 352 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 TSPAN15O95858 294 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 TRAPPC2P0DI81 140 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 TRAPPC2BP0DI82 140 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 TBPP20226 339 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 THEM4Q5T1C6 240 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 TMEM71Q6P5X7 295 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 LIMS2Q7Z4I7 341 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 GALNT11Q8NCW6 608 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 COL24A1Q17RW2 1714 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 MIB2Q96AX9 1013 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 APH1AQ96BI3 265 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 ZNF764Q96H86 408 aaPredicted RBP14.44□□□□□ -0.1
GNE-202ENST00000396594 GON7Q9BXV9 100 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 POLDIP2Q9Y2S7 368 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 ANKRD33BA6NCL7 494 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 GOSR2O14653 212 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 LY86O95711 162 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 F2RL1P55085 397 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 HTRA4P83105 476 aaPredicted RBP14.44□□□□□ -0.1
GNE-202ENST00000396594 ZNF836Q6ZNA1 936 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 ADGRE4PQ86SQ3 457 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 SLC29A1Q99808 456 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 RTL8AQ9BWD3 113 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 PRAMEF27A3QJZ7 478 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 TFP02787 698 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 EGR3Q06889 387 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 SELPLGQ14242 412 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 KDM4DQ6B0I6 523 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 IFI44Q8TCB0 444 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 GABARAPL3Q9BY60 117 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 EIF5A2Q9GZV4 153 aaKnown RBP14.44□□□□□ -0.1
GNE-202ENST00000396594 TM7SF3Q9NS93 570 aa14.44□□□□□ -0.1
GNE-202ENST00000396594 TRAV27A0A087WT01 109 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 TGM6O95932 706 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 RFX2P48378 723 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 SHHQ15465 462 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 PARM1Q6UWI2 310 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 CYB561A3Q8NBI2 242 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 TAAR8Q969N4 342 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 TRIM43Q96BQ3 446 aaPredicted RBP14.43□□□□□ -0.1
GNE-202ENST00000396594 ZNF681Q96N22 645 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 CNTNAP3BQ96NU0 1288 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 LMF1Q96S06 567 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 USB1Q9BQ65 265 aaKnown RBP14.43□□□□□ -0.1
GNE-202ENST00000396594 AK6Q9Y3D8 172 aaKnown RBP14.43□□□□□ -0.1
GNE-202ENST00000396594 HDGFL3Q9Y3E1 203 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 XRCC2O43543 280 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 OR2T11Q8NH01 316 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 RHOXF1Q8NHV9 184 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 C17orf50Q8WW18 174 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 TIMD4Q96H15 378 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 OR2A14Q96R47 310 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 COQ3Q9NZJ6 369 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 MYH15Q9Y2K3 1946 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 CCDC187A0A096LP49 1063 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 MYOCOSA0A1B0GUC4 107 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 BMP1P13497 986 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 MCCD1P59942 119 aaPredicted RBP14.43□□□□□ -0.1
GNE-202ENST00000396594 HBG1P69891 147 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 HBG2P69892 147 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 ZXDBP98169 803 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 MAP4K2Q12851 820 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 NDUFAF7Q7L592 441 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 GALNT10Q86SR1 603 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 OR13C2Q8NGS9 318 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 DUSP19Q8WTR2 217 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 MAFIPQ8WZ33 124 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 RIMS4Q9H426 269 aaPredicted RBP14.43□□□□□ -0.1
GNE-202ENST00000396594 GPATCH2Q9NW75 528 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 ZNF391Q9UJN7 358 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 A0A0A6YYH2 397 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 A6NJ64 397 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 PLPP1O14494 284 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 TSPAN4O14817 238 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 SYT6Q5T7P8 510 aaPredicted RBP14.43□□□□□ -0.1
GNE-202ENST00000396594 SSX8Q7RTT4 187 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 ELF4Q99607 663 aaPredicted RBP14.43□□□□□ -0.1
GNE-202ENST00000396594 PPA2Q9H2U2 334 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 STARD5Q9NSY2 213 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 NLKQ9UBE8 527 aa14.43□□□□□ -0.1
GNE-202ENST00000396594 DCDC2BA2VCK2 349 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms