RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ANKUB1A6NFN9 424 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 PHYHO14832 338 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 BGLAPP02818 100 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 IL7P13232 177 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 SHC1P29353 583 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 HCCSP53701 268 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 KLHL15Q96M94 604 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 ATF6BQ99941 703 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 TTYH2Q9BSA4 534 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 MIXL1Q9H2W2 232 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 ZNF346Q9UL40 294 aaKnown RBP14.65□□□□□ -0.06
SNX6-202ENST00000396526 APOBEC1P41238 236 aaKnown RBP14.64□□□□□ -0.07
SNX6-202ENST00000396526 MAP2K6P52564 334 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 FBXW4P57775 412 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 TP53BP1Q12888 1972 aaPredicted RBP14.64□□□□□ -0.07
SNX6-202ENST00000396526 IL18Q14116 193 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 CNIH2Q6PI25 160 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 LSRQ86X29 649 aaPredicted RBP14.64□□□□□ -0.07
SNX6-202ENST00000396526 ITPKCQ96DU7 683 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 PPP4R1LQ9P1A2 415 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 LAMP5Q9UJQ1 280 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 D6RAR5 112 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 RPTNQ6XPR3 784 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 ADGRG3Q86Y34 549 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 ZNF511Q8NB15 262 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 MR1Q95460 341 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 METTL7AQ9H8H3 244 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 WDR54Q9H977 334 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 OCIAD1Q9NX40 245 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 FAM171A2A8MVW0 826 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 HLA-DQA2P01906 255 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 RAB3BP20337 219 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 INSL4Q14641 139 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 GLYR1Q49A26 553 aaPredicted RBP14.64□□□□□ -0.07
SNX6-202ENST00000396526 SSX6Q7RTT6 188 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 DCLRE1CQ96SD1 692 aaKnown RBP14.64□□□□□ -0.07
SNX6-202ENST00000396526 CTRCQ99895 268 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 SLC22A4Q9H015 551 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 SERINC1Q9NRX5 453 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 IKZF2Q9UKS7 526 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 FBXO4Q9UKT5 387 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 GRIP1Q9Y3R0 1128 aa14.64□□□□□ -0.07
SNX6-202ENST00000396526 HPGDSO60760 199 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 NCR1O76036 304 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 ZNF41P51814 821 aaPredicted RBP14.63□□□□□ -0.07
SNX6-202ENST00000396526 RPL27P61353 136 aaKnown RBP14.63□□□□□ -0.07
SNX6-202ENST00000396526 DBPQ10586 325 aaPredicted RBP14.63□□□□□ -0.07
SNX6-202ENST00000396526 ZMAT1Q5H9K5 638 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 ZNF544Q6NX49 715 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 TMEM205Q6UW68 189 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 OR6S1Q8NH40 331 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 PMEPA1Q969W9 287 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 TSPAN32Q96QS1 320 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 SPSB2Q99619 263 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 APMAPQ9HDC9 416 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 EYSQ5T1H1 3165 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 FLRT2O43155 660 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 SLC2A2P11168 524 aaPredicted RBP14.63□□□□□ -0.07
SNX6-202ENST00000396526 GRPRP30550 384 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 EVX1P49640 407 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 FAM69BQ5VUD6 431 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 SLC23A3Q6PIS1 610 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 OR2I1PQ8NGU4 316 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 DDIT4LQ96D03 193 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 SLITRK2Q9H156 845 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 MYOTQ9UBF9 498 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 ST6GALNAC2Q9UJ37 374 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 FKBP7Q9Y680 259 aa14.63□□□□□ -0.07
SNX6-202ENST00000396526 TRAV1-2A0A0B4J238 106 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 TP53I11O14683 189 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 TFPIP10646 304 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 LINC01590Q5TEZ4 76 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 ZNF385CQ66K41 422 aaPredicted RBP14.62□□□□□ -0.07
SNX6-202ENST00000396526 MZT2BQ6NZ67 158 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 CADM3Q8N126 398 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 YIPF7Q8N8F6 280 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 OR6N2Q8NGY6 317 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 NXPE2Q96DL1 559 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 SNX18Q96RF0 628 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 INTS14Q96SY0 518 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 SDHCQ99643 169 aaPredicted RBP14.62□□□□□ -0.07
SNX6-202ENST00000396526 NEURL2Q9BR09 285 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 NUP210LQ5VU65 1888 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 LINC00854A0A1B0GVQ3 168 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 TMEM72A0PK05 275 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 CENPBD1B2RD01 187 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 PATE3B3GLJ2 98 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 PDCD5O14737 125 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 FOXL2P58012 376 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 ZNF79Q15937 498 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 HSD17B12Q53GQ0 312 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 OR5M10Q6IEU7 315 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 GDPD3Q7L5L3 318 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 LRRC28Q86X40 367 aaPredicted RBP14.62□□□□□ -0.07
SNX6-202ENST00000396526 PGLYRP3Q96LB9 341 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 TSSK2Q96PF2 358 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 SYT4Q9H2B2 425 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 TXNIPQ9H3M7 391 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 WDR76Q9H967 626 aa14.62□□□□□ -0.07
SNX6-202ENST00000396526 A0A1W2PQ09 198 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms