RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 CLDN12P56749 244 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 GPLD1P80108 840 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 ZNF117Q03924 483 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 ZNF362Q5T0B9 420 aaPredicted RBP10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 ATG4DQ86TL0 474 aaPredicted RBP10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 PM20D2Q8IYS1 436 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 CTRCQ99895 268 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 ZNF649Q9BS31 505 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 ZNF426Q9BUY5 554 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 CACNG6Q9BXT2 260 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 BEX1Q9HBH7 125 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 TAS2R10Q9NYW0 307 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 COPS3Q9UNS2 423 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 V9GY05 133 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 SPAG17Q6Q759 2223 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 A0A1W2PR77 199 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 IDSB3KWA1 339 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 UBL3O95164 117 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 GUSBP08236 651 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 GLB1P16278 677 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 GALNSP34059 522 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 RCVRNP35243 200 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 CDONQ4KMG0 1287 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 ESPNLQ6ZVH7 1005 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 OR5H6Q8NGV6 325 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 LPAR4Q99677 370 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 CCDC86Q9H6F5 360 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 CKLFQ9UBR5 152 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 BOLA1Q9Y3E2 137 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 NPIPA5E9PKD4 350 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 NPIPB9F8W1W9 429 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 SLC43A1O75387 559 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 ARSBP15848 533 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 STOMP27105 288 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 RPS27P42677 84 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 SKP2Q13309 424 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 YIF1BQ5BJH7 314 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 TMEM69Q5SWH9 247 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 LIPNQ5VXI9 398 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 VASNQ6EMK4 673 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 OVCH1Q7RTY7 1134 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 TRIM63Q969Q1 353 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 CREB3L1Q96BA8 519 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 PPIL3Q9H2H8 161 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 ZNF346Q9UL40 294 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 NPIPA1Q9UND3 350 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 POLR1DQ9Y2S0 133 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 SEC16AO15027 2179 aa10.53□□□□□ -0.72
PDXDC1-202ENST00000396410 TMED7-TICAM2A0A0A6YYA0 188 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 TRAV1-2A0A0B4J238 106 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 NUDT21O43809 227 aaKnown RBP10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 EPXP11678 715 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 ADAMTS14Q8WXS8 1223 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 HLA-CQ95604 372 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 TAAR8Q969N4 342 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 WWTR1Q9GZV5 400 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 PCED1AQ9H1Q7 454 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 SRPK3Q9UPE1 567 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 TMED7Q9Y3B3 224 aa10.52□□□□□ -0.72
PDXDC1-202ENST00000396410 PHYHO14832 338 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 EIF4E2O60573 245 aaKnown RBP10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 SLC16A7O60669 478 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 ATF1P18846 271 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 POLR2HP52434 150 aaKnown RBP10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 PLAURQ03405 335 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 IL10RAQ13651 578 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.52□□□□□ -0.737e-7■□□□□ 9.5
PDXDC1-202ENST00000396410 UBE2NLQ5JXB2 153 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 FCRLAQ7L513 359 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 FGD2Q7Z6J4 655 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 ZNF227Q86WZ6 799 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 SNX18Q96RF0 628 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 WDR76Q9H967 626 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 ST6GALNAC2Q9UJ37 374 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 GIFP27352 417 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 HLA-DMAP28067 261 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 ALKBH1Q13686 389 aaKnown RBP10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 LINC00114Q6XXX2 140 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 FCAMRQ8WWV6 532 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 PGLYRP3Q96LB9 341 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 ORAI3Q9BRQ5 295 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 GALNT9Q9HCQ5 603 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 EXOSC3Q9NQT5 275 aaKnown RBP10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 VDAC3Q9Y277 283 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 OGG1O15527 345 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 RAD1O60671 282 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 CLDN20P56880 219 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 ADAM8P78325 824 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 ACY1Q03154 408 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 Q499Y3 187 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 PHF19Q5T6S3 580 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 HACD4Q5VWC8 232 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 PRSS45Q7RTY3 260 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 OR10H5Q8NGA6 315 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 TSPAN10Q9H1Z9 355 aaPredicted RBP10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 FKRPQ9H9S5 495 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 LANCL2Q9NS86 450 aa10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 ATXN7L1Q9ULK2 861 aaPredicted RBP10.52□□□□□ -0.73
PDXDC1-202ENST00000396410 HIF3AQ9Y2N7 669 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms