RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SLC37A3Q8NCC5 494 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 ADPRHL1Q8NDY3 354 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 IPCEF1Q8WWN9 437 aaPredicted RBP18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 DEFB127Q9H1M4 99 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 PAK1IP1Q9NWT1 392 aaPredicted RBP18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 PSORS1C1Q9UIG5 152 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 ZNF346Q9UL40 294 aaKnown RBP18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 RPL36Q9Y3U8 105 aaKnown RBP18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 A0A1W2PRG6 482 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 CLCA1A8K7I4 914 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 ACVR2AP27037 513 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 APOFQ13790 326 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 EMC4Q5J8M3 183 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 RNFT1Q5M7Z0 435 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 PAQR6Q6TCH4 344 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 JAZF1Q86VZ6 243 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 CYB561A3Q8NBI2 242 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 SGCDQ92629 289 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 GGHQ92820 318 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 EXTL1Q92935 676 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 RFKQ969G6 155 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 DUSP21Q9H596 190 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 LDAHQ9H6V9 325 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 CCNB1IP1Q9NPC3 277 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 A0A1W2PNV4 684 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 H0YC42 278 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 TFECO14948 347 aaPredicted RBP18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 EIF1BO60739 113 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 TXNDC12O95881 172 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 ZNF24P17028 368 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 SUCLG1P53597 346 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 CDH11P55287 796 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 RPL27P61353 136 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 PIGFQ07326 219 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 KRR1Q13601 381 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 BLMHQ13867 455 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 ACKR1Q16570 336 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 AADACL4Q5VUY2 407 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 HBMQ6B0K9 141 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 TMEM225Q6GV28 225 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 ABHD17AQ96GS6 310 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 NMNAT3Q96T66 252 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 CCDC90BQ9GZT6 254 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 TXNIPQ9H3M7 391 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 EXO5Q9H790 373 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 ZDHHC11Q9H8X9 412 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 MED20Q9H944 212 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 FANCFQ9NPI8 374 aa18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.3■□□□□ 0.52
VCPKMT-202ENST00000395860 LOC400499M0QZD8 3231 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 A0A087WV48 116 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 AQP7P3A6NL99 342 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 K7EM74 188 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 CLPTM1O96005 669 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 IGHMP01871 453 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 DBTP11182 482 aaKnown RBP18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 HLA-DOBP13765 273 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 POU3F1Q03052 451 aaPredicted RBP18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 ZNF91Q05481 1191 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 ZNF239Q16600 458 aaKnown RBP18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 PDSS1Q5T2R2 415 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 ZNF773Q6PK81 442 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 Q6ZS92 163 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 TRILQ7L0X0 811 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 PXKQ7Z7A4 578 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 GID4Q8IVV7 300 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 BBS1Q8NFJ9 593 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 OR2V1Q8NHB1 315 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 MYDGFQ969H8 173 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 ZHX1-C8orf76Q96EF9 292 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 NAA11Q9BSU3 229 aaPredicted RBP18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 COPS4Q9BT78 406 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 ERVK-18Q9QC07 812 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 FRYQ5TBA9 3013 aa18.29■□□□□ 0.52
VCPKMT-202ENST00000395860 CEP295Q9C0D2 2601 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 CFAP47Q6ZTR5 3102 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 M0R3G1 203 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 TAF4O00268 1085 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 DNPH1O43598 174 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 ITGB2P05107 769 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 ACVR1BP36896 505 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 P2RY4P51582 365 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 CARD18P57730 90 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 RAC3P60763 192 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 TUBA4AP68366 448 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 MESTQ5EB52 335 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 LEG1Q6P5S2 330 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 GPAT4Q86UL3 456 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 GHDCQ8N2G8 530 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 NPEPL1Q8NDH3 523 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 PTP4A1Q93096 173 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 ABTB1Q969K4 478 aaPredicted RBP18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 ADGRG7Q96K78 797 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 HCAR1Q9BXC0 346 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 MFRPQ9BY79 579 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 FKBP14Q9NWM8 211 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 CNOT2Q9NZN8 540 aaKnown RBP18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 SNX5Q9Y5X3 404 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 LIPGQ9Y5X9 500 aa18.28■□□□□ 0.52
VCPKMT-202ENST00000395860 TRGV5A0A0B4J1U4 118 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms