RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 HOXC5Q00444 222 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 EGR4Q05215 589 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 LRRC74AQ0VAA2 488 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 MSMPQ1L6U9 139 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 ELFN2Q5R3F8 820 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 OGFOD2Q6N063 350 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 CARM1Q86X55 608 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 CLDND2Q8NHS1 167 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 SLC38A5Q8WUX1 472 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 MRPL24Q96A35 216 aaKnown RBP18.2■□□□□ 0.5
TRAF4-203ENST00000394925 MRPL37Q9BZE1 423 aaKnown RBP18.2■□□□□ 0.5
TRAF4-203ENST00000394925 LPAR2Q9HBW0 351 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 PNPOQ9NVS9 261 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 HIF1ANQ9NWT6 349 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 B3GAT1Q9P2W7 334 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 REV1Q9UBZ9 1251 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 MGAM2Q2M2H8 2515 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 BIRC5O15392 142 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 SYNGR3O43761 229 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 RGS9O75916 674 aaPredicted RBP18.19■□□□□ 0.5
TRAF4-203ENST00000394925 NR4A1P22736 598 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 COL8A2P25067 703 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 GPR6P46095 362 aaPredicted RBP18.19■□□□□ 0.5
TRAF4-203ENST00000394925 MVDP53602 400 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 DSTNP60981 165 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 POU3F1Q03052 451 aaPredicted RBP18.19■□□□□ 0.5
TRAF4-203ENST00000394925 DEF8Q6ZN54 512 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 CCDC36Q8IYA8 594 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 PIK3C3Q8NEB9 887 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 ZFAND2BQ8WV99 257 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 TMEM186Q96B77 213 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 ZBTB18Q99592 522 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 SPATA9Q9BWV2 254 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 ARMC7Q9H6L4 198 aa18.19■□□□□ 0.5
TRAF4-203ENST00000394925 CACYBPQ9HB71 228 aaKnown RBP18.19■□□□□ 0.5
TRAF4-203ENST00000394925 ZNF99A8MXY4 864 aaPredicted RBP18.18■□□□□ 0.5
TRAF4-203ENST00000394925 FAM157AC9JC47 383 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 M0R082 166 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 M0R233 179 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 M0R3G1 203 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 HLA-HP01893 362 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 HPXP02790 462 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 CD79AP11912 226 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 BGNP21810 368 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 ACTG1P63261 375 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 PHYHD1Q5SRE7 291 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 ZNF417Q8TAU3 575 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 TMEM19Q96HH6 336 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 MS4A3Q96HJ5 214 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 OR2M2Q96R28 347 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 ZNF587Q96SQ5 575 aaPredicted RBP18.18■□□□□ 0.5
TRAF4-203ENST00000394925 SYT3Q9BQG1 590 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 HAO1Q9UJM8 370 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 GPR45Q9Y5Y3 372 aa18.18■□□□□ 0.5
TRAF4-203ENST00000394925 MEGF8Q7Z7M0 2845 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 SDHDO14521 159 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 AIM2O14862 343 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 SAGP10523 405 aaPredicted RBP18.17■□□□□ 0.5
TRAF4-203ENST00000394925 CBLP22681 906 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 ALDH3B1P43353 468 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 EVX1P49640 407 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 PIGFQ07326 219 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 SLC9B1Q4ZJI4 515 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 ZNF311Q5JNZ3 666 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 CARD17Q5XLA6 110 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 SHQ1Q6PI26 577 aaKnown RBP18.17■□□□□ 0.5
TRAF4-203ENST00000394925 THSD4Q6ZMP0 1018 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 KIRREL3Q8IZU9 778 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 TMEM123Q8N131 208 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 TAAR8Q969N4 342 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 MS4A5Q9H3V2 200 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 B3GNT2Q9NY97 397 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 IFT52Q9Y366 437 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 GRIP1Q9Y3R0 1128 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 SPEF1Q9Y4P9 236 aa18.17■□□□□ 0.5
TRAF4-203ENST00000394925 A0A0G2JPF8 293 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 HNRNPCL2B2RXH8 293 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 HNRNPCL3B7ZW38 293 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 WNT9BO14905 357 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 AKAP8O43823 692 aaKnown RBP18.16■□□□□ 0.5
TRAF4-203ENST00000394925 HNRNPCL1O60812 293 aaKnown RBP18.16■□□□□ 0.5
TRAF4-203ENST00000394925 ANP32DO95626 131 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 MSMBP08118 114 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 HNRNPCL4P0DMR1 293 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 GRPRP30550 384 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 SEC24CP53992 1094 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 STX3Q13277 289 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 GSG1Q2KHT4 349 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 C3orf56Q8N813 242 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 ZNF418Q8TF45 676 aaPredicted RBP18.16■□□□□ 0.5
TRAF4-203ENST00000394925 RDH5Q92781 318 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 LRRC37BQ96QE4 947 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 TPT1P8Q9HAU6 139 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 TREM2Q9NZC2 230 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 RPS6KB2Q9UBS0 482 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 NOX1Q9Y5S8 564 aa18.16■□□□□ 0.5
TRAF4-203ENST00000394925 TMEM247A6NEH6 219 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 TRAF3IP2O43734 574 aaPredicted RBP18.15■□□□□ 0.5
TRAF4-203ENST00000394925 OR2T1O43869 369 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 ACHEP22303 614 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms