RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZNF740Q8NDX6 193 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 RAB40AQ8WXH6 277 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 OR1E3Q8WZA6 343 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 CPNE5Q9HCH3 593 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 RPS10P5Q9NQ39 176 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 B3GAT1Q9P2W7 334 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 MMP17Q9ULZ9 603 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 DDX60Q8IY21 1712 aaKnown RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 EDDM3BP56851 147 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 GABREP78334 506 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 IL10RAQ13651 578 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 HES1Q14469 280 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 SLC9A3R2Q15599 337 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 PDLIM3Q53GG5 364 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 SLC48A1Q6P1K1 146 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 LILRA3Q8N6C8 439 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 OR56B1Q8NGI3 324 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 OR4A16Q8NH70 328 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 SELENOIQ9C0D9 397 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 MRPS28Q9Y2Q9 187 aaKnown RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 COL16A1Q07092 1604 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 STMND1H3BQB6 276 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 RFPL3O75679 317 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 HLA-AP01891 365 aaKnown RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 GM2AP17900 193 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 EMX1Q04741 257 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 C12orf45Q8N5I9 185 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 OR13C9Q8NGT0 318 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 TFAP2CQ92754 450 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 NMNAT3Q96T66 252 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 WWTR1Q9GZV5 400 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 PLCXD1Q9NUJ7 323 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 PGAP2Q9UHJ9 254 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 SLCO2B1O94956 709 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 GSTP1P09211 210 aaKnown RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 TACR1P25103 407 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 CD1CP29017 333 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 KCTD11Q693B1 232 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 ZNF454Q8N9F8 522 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 OR5D18Q8NGL1 313 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 UBL7Q96S82 380 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 TMEM59Q9BXS4 323 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 A4GALTQ9NPC4 353 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 ATG4BQ9Y4P1 393 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 A0A1B0GWA3 101 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 K7ESM1 405 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 P2RY10O00398 339 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 GRPP07492 148 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 RPL35P42766 123 aaKnown RBP9.6□□□□□ -0.87
COL4A6-203ENST00000394872 KIR2DL3P43628 341 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 OR2G6Q5TZ20 316 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 HACD4Q5VWC8 232 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 APOOLQ6UXV4 268 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 ZNF836Q6ZNA1 936 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 RTN4RL1Q86UN2 441 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-203ENST00000394872 SUMF2Q8NBJ7 301 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 LIN37Q96GY3 246 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-203ENST00000394872 LIN7BQ9HAP6 207 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 KCNJ16Q9NPI9 418 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 KIF25Q9UIL4 384 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 H0Y8X5 98 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 GNB3P16520 340 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 IL3RAP26951 378 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 ACTBL2Q562R1 376 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 L3MBTL4Q8NA19 623 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 PAQR8Q8TEZ7 354 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 TMEM255BQ8WV15 326 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 RAB3CQ96E17 227 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 SLA2Q9H6Q3 261 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 NOX4Q9NPH5 578 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 MED17Q9NVC6 651 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-203ENST00000394872 ACOD1A6NK06 481 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 C1orf196B1AJZ1 125 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 PRICKLE3O43900 615 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-203ENST00000394872 PRKAR1BP31321 381 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 CLVS2Q5SYC1 327 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 ANKRD33Q7Z3H0 272 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 BEST4Q8NFU0 473 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 DEFB127Q9H1M4 99 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 GFOD1Q9NXC2 390 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 GPR171O14626 319 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 TNFRSF10CO14798 259 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 TAPBPO15533 448 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 OR2T7P0C7T2 308 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 RPS2P15880 293 aaKnown RBP9.6□□□□□ -0.87
COL4A6-203ENST00000394872 GIPRP48546 466 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 NKX6-1P78426 367 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-203ENST00000394872 COX20Q5RI15 118 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 ABHD17CQ6PCB6 329 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 BRICD5Q6PL45 260 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 ZNF767PQ75MW2 155 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 RBMXL3Q8N7X1 1067 aaKnown RBP9.6□□□□□ -0.87
COL4A6-203ENST00000394872 OR2T27Q8NH04 317 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 APH1AQ96BI3 265 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 NRSN2Q9GZP1 204 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 A0A1W2PS29 197 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 TNFRSF10AO00220 468 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 B3GALT4O96024 378 aa9.6□□□□□ -0.87
COL4A6-203ENST00000394872 MAKP20794 623 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms