RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 TRAM1Q15629 374 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 HLA-DQA1Q5Y7H0 255 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 ASB18Q6ZVZ8 466 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 JAZF1Q86VZ6 243 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 PLXDC1Q8IUK5 500 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 RDH10Q8IZV5 341 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 OR1F2PQ96R84 312 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 LPAR4Q99677 370 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 MESP1Q9BRJ9 268 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 ALG12Q9BV10 488 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 RNF121Q9H920 327 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 SRA1Q9HD15 236 aaKnown RBP13.37□□□□□ -0.27
CDH16-202ENST00000394055 CTSFQ9UBX1 484 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 WDR87Q6ZQQ6 2873 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 EML5Q05BV3 1969 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 FER1L5A0AVI2 2057 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 IGHV3-20A0A0C4DH32 117 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 ATP6V1G2-DDX39BF2Z307 99 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 BCAT2O15382 392 aaPredicted RBP13.37□□□□□ -0.27
CDH16-202ENST00000394055 LANCL1O43813 399 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 ATF4P18848 351 aaPredicted RBP13.37□□□□□ -0.27
CDH16-202ENST00000394055 CD53P19397 219 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 RAB3BP20337 219 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 ELAVL1Q15717 326 aaKnown RBP13.37□□□□□ -0.27
CDH16-202ENST00000394055 RNASE12Q5GAN4 147 aaKnown RBP13.37□□□□□ -0.27
CDH16-202ENST00000394055 C1QL3Q5VWW1 255 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 PLET1Q6UQ28 207 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 MS4A15Q8N5U1 240 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 FRMD6Q96NE9 622 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 NMNAT2Q9BZQ4 307 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 SLC19A3Q9BZV2 496 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 CHRNA10Q9GZZ6 450 aa13.37□□□□□ -0.27
CDH16-202ENST00000394055 DCTN6O00399 190 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 LYRM1O43325 122 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 NUDT21O43809 227 aaKnown RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 DCNP07585 359 aaKnown RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 SNRPBP14678 240 aaKnown RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 TALDO1P37837 337 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 RPL18Q07020 188 aaKnown RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 PLCXD2Q0VAA5 305 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 OTPQ5XKR4 325 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 PTCRAQ6ISU1 281 aaPredicted RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 LRRC28Q86X40 367 aaPredicted RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 SLITRK4Q8IW52 837 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 C7orf57Q8NEG2 295 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 OR4D9Q8NGE8 314 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 LRFN5Q96NI6 719 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 CYSLTR2Q9NS75 346 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 NPAP1Q9NZP6 1156 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 HIF3AQ9Y2N7 669 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 AK6Q9Y3D8 172 aaKnown RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 PCDHGB7Q9Y5F8 929 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 FAM240BA0A1B0GVZ2 78 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 TCRBV16S1A1N1A0A5B0 115 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 OGG1O15527 345 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 RPP14O95059 124 aaKnown RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 HLA-DQB1P01920 261 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 CD14P08571 375 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 PRKAR1AP10644 381 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 ADH7P40394 386 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 RPS27P42677 84 aaKnown RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 LINC01590Q5TEZ4 76 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 C16orf47Q6ZP98 133 aaPredicted RBP13.36□□□□□ -0.27
CDH16-202ENST00000394055 SYS1Q8N2H4 156 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 HSD17B8Q92506 261 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 TAAR8Q969N4 342 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 ST6GAL2Q96JF0 529 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 VN1R1Q9GZP7 353 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 FGF21Q9NSA1 209 aa13.36□□□□□ -0.27
CDH16-202ENST00000394055 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 TVP23AA6NH52 213 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 GLCEO94923 617 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 TFPIP10646 304 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 AFF3P51826 1226 aaKnown RBP13.35□□□□□ -0.27
CDH16-202ENST00000394055 RPS11P62280 158 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH16-202ENST00000394055 FAM122BQ7Z309 247 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 D2HGDHQ8N465 521 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 MVB12AQ96EY5 273 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 TTYH2Q9BSA4 534 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 PCED1AQ9H1Q7 454 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 RBFOX1Q9NWB1 397 aaKnown RBP13.35□□□□□ -0.27
CDH16-202ENST00000394055 ATXN7L1Q9ULK2 861 aaPredicted RBP13.35□□□□□ -0.27
CDH16-202ENST00000394055 KLHDC2Q9Y2U9 406 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 CACNA1CQ13936 2221 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 TMEM72A0PK05 275 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 ACOD1A6NK06 481 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 GPANK1O95872 356 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 ASAH2BP0C7U1 165 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 GIMD1P0DJR0 217 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 GLB1P16278 677 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 ATF1P18846 271 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 RAB25P57735 213 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 BIKQ13323 160 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 PAMR1Q6UXH9 720 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 ESPNLQ6ZVH7 1005 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 TPRA1Q86W33 373 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 LRRC75AQ8NAA5 344 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 CEP76Q8TAP6 659 aa13.35□□□□□ -0.27
CDH16-202ENST00000394055 GPX7Q96SL4 187 aaPredicted RBP13.35□□□□□ -0.27
CDH16-202ENST00000394055 TBL1XR1Q9BZK7 514 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms