RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 LUZP4Q9P127 313 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 VPS29Q9UBQ0 182 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 MOKQ9UQ07 419 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 FBXO7Q9Y3I1 522 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 ATAD5Q96QE3 1844 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 CACNA1CQ13936 2221 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TRAV18A0A075B6X5 111 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 PTGESO14684 152 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 PEX11BO96011 259 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 PRR35P0CG20 571 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 LAMP1P11279 417 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 GPX2P18283 190 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 NSG1P42857 185 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 RPIAP49247 311 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 SUOXP51687 545 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 CXADRP78310 365 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 H3F3AP84243 136 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 C9orf64Q5T6V5 341 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 UBE3DQ7Z6J8 389 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF280BQ86YH2 543 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 C1orf87Q8N0U7 546 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 NPWQ8N729 165 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 CHST4Q8NCG5 386 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 THEM6Q8WUY1 208 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 R3HDM4Q96D70 268 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF558Q96NG5 402 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 OR5B12Q96R08 314 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 MRI1Q9BV20 369 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 CIPCQ9C0C6 399 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 DNAJC4Q9NNZ3 241 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 PDE7BQ9NP56 450 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 SUSD2Q9UGT4 822 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 DKKL1Q9UK85 242 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 FBXW11Q9UKB1 542 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 RNF24Q9Y225 148 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TRIP11Q15643 1979 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TCRBV21S2A2A0A5A6 115 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TSPAN11A1L157 253 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 GALR3O60755 368 aaPredicted RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 AIFM1O95831 613 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 PDYNP01213 254 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 CRYABP02511 175 aaKnown RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 SFTPBP07988 381 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 PGAM2P15259 253 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 IRS1P35568 1242 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 MANFP55145 182 aaKnown RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 NRG3P56975 720 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 RAC1P63000 192 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 SERINC3Q13530 473 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 UBE2V2Q15819 145 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 SIRPB2Q5JXA9 342 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 C1orf185Q5T7R7 199 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TMEM244Q5VVB8 128 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 FRG2Q64ET8 278 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 NCR3LG1Q68D85 454 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 SLC16A9Q7RTY1 509 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 DCXRQ7Z4W1 244 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TMPRSS12Q86WS5 348 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 GID4Q8IVV7 300 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 MSRB3Q8IXL7 192 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 MUC20Q8N307 709 aaPredicted RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 ABHD4Q8TB40 342 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 NTAN1Q96AB6 310 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 FRG2BQ96QU4 278 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 URM1Q9BTM9 101 aaKnown RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 LGR4Q9BXB1 951 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 COMMD4Q9H0A8 199 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 UBQLN4Q9NRR5 601 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 GPR173Q9NS66 373 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 FAM212BQ9NTI7 297 aaPredicted RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 ACER3Q9NUN7 267 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 NUP205Q92621 2012 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 ANHXE9PGG2 379 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 NDUFB6O95139 128 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SLC25A14O95258 325 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 OR8G3PP0DMU2 310 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 RAC2P15153 192 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 MUC1P15941 1255 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 RCC1P18754 421 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 GJA4P35212 333 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 BMI1P35226 326 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SCNN1AP37088 669 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 OR12D2P58182 307 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 RPL19P84098 196 aaKnown RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 COL5A1-AS1Q5SY13 56 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 FAM27D1Q5T7N8 215 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 CALHM3Q86XJ0 350 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 PRSS35Q8N3Z0 413 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 JSRP1Q96MG2 331 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SMOQ99835 787 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 MTIF3Q9H2K0 278 aaKnown RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SLC25A13Q9UJS0 675 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 A4GNTQ9UNA3 340 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 KNL1Q8NG31 2342 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF831Q5JPB2 1677 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SCN4AP35499 1836 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 TRBV2A0A0J9YWF9 115 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms