RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CNN2Q99439 309 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 TIMP4Q99727 224 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 PROK2Q9HC23 129 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF346Q9UL40 294 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 A0A087WZY1 265 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 GLCEO94923 617 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 CCL3P10147 92 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 NBL1P41271 181 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 EIF1P41567 113 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 RPS3AP61247 264 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 RAB43Q86YS6 212 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF417Q8TAU3 575 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZBTB8AQ96BR9 441 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZMYND19Q96E35 227 aaPredicted RBP10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 DNAJA3Q96EY1 480 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 ARL5BQ96KC2 179 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF587Q96SQ5 575 aaPredicted RBP10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 SLIRPQ9GZT3 109 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 SERINC1Q9NRX5 453 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 MOKQ9UQ07 419 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 SF3B6Q9Y3B4 125 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 PCDHGB7Q9Y5F8 929 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 NOX1Q9Y5S8 564 aa10.33□□□□□ -0.76
SMARCAL1-203ENST00000392128 LOC101059948A0A1B0GTJ6 334 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 SNPHO15079 494 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 RNF13O43567 381 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 EFNA2O43921 213 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 SERPINI2O75830 405 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR6A2O95222 327 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 LALBAP00709 142 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 INHBBP09529 407 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR2T7P0C7T2 308 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 GABRA5P31644 462 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 IDUAP35475 653 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 CAPZA2P47755 286 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF85Q03923 595 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZP4Q12836 540 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 MOGQ16653 247 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 LINC01590Q5TEZ4 76 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 C3orf33Q6P1S2 294 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ADCK1Q86TW2 530 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR2T27Q8NH04 317 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ADAMTS17Q8TE56 1095 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNRF4Q8WWF5 429 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 DTNBP1Q96EV8 351 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 SNX18Q96RF0 628 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 TBX5Q99593 518 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 IRF2BPLQ9H1B7 796 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 RNF167Q9H6Y7 350 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 RPRD1BQ9NQG5 326 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 PMF1-BGLAPU3KQ54 211 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 SHISA8B8ZZ34 492 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 C11orf98E9PRG8 122 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 TFP02787 698 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 IL11P20809 199 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 FKBP2P26885 142 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 RPL27P61353 136 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 GPR50Q13585 617 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF468Q5VIY5 522 aaPredicted RBP10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 GPALPP1Q8IXQ4 340 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 GHDCQ8N2G8 530 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ARIH2OSQ8N7S6 290 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR51L1Q8NGJ5 315 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF519Q8TB69 540 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 TXNIPQ9H3M7 391 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 ISG20L2Q9H9L3 353 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 BABAM2Q9NXR7 383 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 CCDC59Q9P031 241 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 SSR3Q9UNL2 185 aa10.32□□□□□ -0.76
SMARCAL1-203ENST00000392128 DOCK10Q96BY6 2186 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 SPAARA0A1B0GVQ0 90 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 A0A1W2PQL4 384 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 LIPT2A6NK58 231 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 SNX4O95219 450 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 RENP00797 406 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 MT-ND5P03915 603 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 AHCYP23526 432 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 CD82P27701 267 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 GTF2E2P29084 291 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 SELENBP1Q13228 472 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR7A5Q15622 319 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 ACKR1Q16570 336 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 ACER2Q5QJU3 275 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 JMJD6Q6NYC1 403 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 H1FNTQ75WM6 255 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 TMPRSS12Q86WS5 348 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 KLBQ86Z14 1044 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR6K6Q8NGW6 343 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR2T4Q8NH00 348 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 SLC25A43Q8WUT9 341 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 TMEM41AQ96HV5 264 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 ALG12Q9BV10 488 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 EXOSC4Q9NPD3 245 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 FANCFQ9NPI8 374 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 FAM86C1Q9NVL1 165 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 ALKBH4Q9NXW9 302 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 NPIPB13A6NJU9 1138 aa10.31□□□□□ -0.76
SMARCAL1-203ENST00000392128 NPIPB4C9JG80 1138 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms