RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 ATP6V0D2Q8N8Y2 350 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 OR56B4Q8NH76 319 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 ZNF564Q8TBZ8 553 aaPredicted RBP2.24□□□□□ -2.05
PTPRC-205ENST00000391970 ENKURQ8TC29 256 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 PHOSPHO2Q8TCD6 241 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 SLC2A14Q8TDB8 520 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 NEIL2Q969S2 332 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 CCNL2Q96S94 520 aaPredicted RBP2.24□□□□□ -2.05
PTPRC-205ENST00000391970 TBX15Q96SF7 602 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 SECISBP2Q96T21 854 aaKnown RBP2.24□□□□□ -2.05
PTPRC-205ENST00000391970 NPAS2Q99743 824 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 DHRS9Q9BPW9 319 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 KLHDC3Q9BQ90 382 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 CNPY3Q9BT09 278 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 TMEM43Q9BTV4 400 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 MAGT1Q9H0U3 335 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 CLSTN2Q9H4D0 955 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 PSTPIP2Q9H939 334 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 POPDC2Q9HBU9 364 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 VCX3AQ9NNX9 186 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 RMND1Q9NWS8 449 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 B4GALT7Q9UBV7 327 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 MTRF1LQ9UGC7 380 aaKnown RBP2.24□□□□□ -2.05
PTPRC-205ENST00000391970 HMGXB4Q9UGU5 601 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 DCDC2Q9UHG0 476 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 PHF11Q9UIL8 331 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 PYCARDQ9ULZ3 195 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 UBQLN1Q9UMX0 589 aaKnown RBP2.24□□□□□ -2.05
PTPRC-205ENST00000391970 CAB39Q9Y376 341 aaPredicted RBP2.24□□□□□ -2.05
PTPRC-205ENST00000391970 CHTOPQ9Y3Y2 248 aaKnown RBP2.24□□□□□ -2.05
PTPRC-205ENST00000391970 COMMD3-BMI1R4GMX3 469 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 DENND4BO75064 1496 aaPredicted RBP2.24□□□□□ -2.05
PTPRC-205ENST00000391970 LRRC9Q6ZRR7 1453 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 MYH7P12883 1935 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 MYOM1P52179 1685 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 OVOS2A0A0G2JMS6 1433 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 OVOS2A0A0J9YW53 1432 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 OVOS2Q6IE36 1432 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 TRAPPC8Q9Y2L5 1435 aa2.24□□□□□ -2.05
PTPRC-205ENST00000391970 ABCC12Q96J65 1359 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 PCF11O94913 1555 aaKnown RBP2.23□□□□□ -2.05
PTPRC-205ENST00000391970 A0A1B0GUL6 1792 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 TTC21AQ8NDW8 1320 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.23□□□□□ -2.05
PTPRC-205ENST00000391970 DUOX2Q9NRD8 1548 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 CRYBG1Q9Y4K1 1723 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ADGBQ8N7X0 1667 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 MED14O60244 1454 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ABCC10Q5T3U5 1492 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 RPRD2Q5VT52 1461 aaKnown RBP2.23□□□□□ -2.05
PTPRC-205ENST00000391970 TRAV6A0A075B6T7 132 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 C1orf232A0A0U1RR37 186 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 GOLGA6L7A0A1B0GV03 622 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 A0A1B0GVY2 172 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 PVALEFA0A1B0GWK0 134 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 TMEM114B3SHH9 223 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 H3BQV1 296 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 L7N2F9 121 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ZNF208O43345 1280 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 PRKAB2O43741 272 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 KLHL2O95198 593 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 OR5F1O95221 314 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 LYPD3O95274 346 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 LY6G6DO95868 133 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 IGHV3-48P01763 117 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 KRT14P02533 472 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 LGALS2P05162 132 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 UBTFL6P0CB48 400 aaPredicted RBP2.23□□□□□ -2.05
PTPRC-205ENST00000391970 HSMCR30P0CW71 290 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 POU2F1P14859 743 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ZNF3P17036 446 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 COX5AP20674 150 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ZBTB25P24278 435 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ANXA13P27216 316 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 HMOX2P30519 316 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 RFC4P35249 363 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 PTGDSP41222 190 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 RGRP47804 291 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 HSPA13P48723 471 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 RGS19P49795 217 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 BLVRAP53004 296 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 KRTAP10-5P60370 271 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 RPS8P62241 208 aaKnown RBP2.23□□□□□ -2.05
PTPRC-205ENST00000391970 RPS14P62263 151 aaKnown RBP2.23□□□□□ -2.05
PTPRC-205ENST00000391970 UBE2IP63279 158 aaKnown RBP2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ZNF45Q02386 682 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 FGL1Q08830 312 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ALX1Q15699 326 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 KYAT1Q16773 422 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 MAJINQ3KP22 176 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 SFT2D3Q587I9 215 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 FHL5Q5TD97 284 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 SPECC1LQ69YQ0 1117 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ATL3Q6DD88 541 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 OR52E8Q6IFG1 317 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ZSCAN25Q6NSZ9 544 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 ZNF544Q6NX49 715 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 FAM173BQ6P4H8 233 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 DHRS4L2Q6PKH6 230 aa2.23□□□□□ -2.05
PTPRC-205ENST00000391970 WDR74Q6RFH5 385 aaPredicted RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms