RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 IMPA2O14732 288 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 HPNP05981 417 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 CLUP10909 449 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 HLA-DOBP13765 273 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 MAP2K4P45985 399 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 STARP49675 285 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 PRSS48Q7RTY5 328 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 JAZF1Q86VZ6 243 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 ZFP62Q8NB50 900 aaPredicted RBP24.07■■□□□ 1.44
MSX1-201ENST00000382723 OR9Q1Q8NGQ5 310 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 ZPLD1Q8TCW7 415 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 RNFT2Q96EX2 444 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 KLHL15Q96M94 604 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 TRAPPC4Q9Y296 219 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 NCKAP5O14513 1909 aa24.07■■□□□ 1.44
MSX1-201ENST00000382723 GJE1A6NN92 205 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 TNFSF11O14788 317 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 APOL3O95236 402 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 FADS2O95864 444 aaKnown RBP24.06■■□□□ 1.44
MSX1-201ENST00000382723 CLDN20P56880 219 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 ACKR1Q16570 336 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 NIPAL3Q6P499 406 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 LEG1Q6P5S2 330 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 B3GLCTQ6Y288 498 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 SATL1Q86VE3 508 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 GID4Q8IVV7 300 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 UBQLNLQ8IYU4 475 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 NPEPL1Q8NDH3 523 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 FAM122AQ96E09 287 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 B3GALT5Q9Y2C3 310 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 COMMD3-BMI1R4GMX3 469 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 A0A0J9YW62 118 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 SEC14L5O43304 696 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 GYPBP06028 91 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 CDKN2AP42771 156 aaKnown RBP24.06■■□□□ 1.44
MSX1-201ENST00000382723 MTNR1AP48039 350 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 SLC16A1P53985 500 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 GFRA1P56159 465 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 SLC35A1P78382 337 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 NADK2Q4G0N4 442 aa24.06■■□□□ 1.44
MSX1-201ENST00000382723 PMS2P2O95744 297 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 TXNDC12O95881 172 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 ADRB1P08588 477 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 ADRA2AP08913 450 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 PIPP12273 146 aaPredicted RBP24.05■■□□□ 1.44
MSX1-201ENST00000382723 KLK2P20151 261 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 POU3F2P20265 443 aaPredicted RBP24.05■■□□□ 1.44
MSX1-201ENST00000382723 HTR1FP30939 366 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 RPS7P62081 194 aaKnown RBP24.05■■□□□ 1.44
MSX1-201ENST00000382723 EMX1Q04741 257 aaPredicted RBP24.05■■□□□ 1.44
MSX1-201ENST00000382723 ZP4Q12836 540 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 KRR1Q13601 381 aaKnown RBP24.05■■□□□ 1.44
MSX1-201ENST00000382723 MESTQ5EB52 335 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 GPR139Q6DWJ6 353 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 SLC22A16Q86VW1 577 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 SIGLEC11Q96RL6 698 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 SLC6A15Q9H2J7 730 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 VCX3AQ9NNX9 186 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 LAMA5O15230 3695 aa24.05■■□□□ 1.44
MSX1-201ENST00000382723 PIEZO1Q92508 2521 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 A0A1W2PRG6 482 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 ZNF814B7Z6K7 855 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 H7C1C5 153 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 EIF1AYO14602 144 aaKnown RBP24.04■■□□□ 1.44
MSX1-201ENST00000382723 LCN6P62502 163 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 PMP22Q01453 160 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 MELKQ14680 651 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 HYAL4Q2M3T9 481 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 EMC4Q5J8M3 183 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 GTF2IRD2BQ6EKJ0 949 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 MEPCEQ7L2J0 689 aaKnown RBP24.04■■□□□ 1.44
MSX1-201ENST00000382723 GTF2IRD2Q86UP8 949 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 LGALS12Q96DT0 336 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 TXNIPQ9H3M7 391 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 MED12Q93074 2177 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 APC2O95996 2303 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 TRAV17A0A0B4J275 112 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 OR6C68A6NDL8 312 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 VGLL3A8MV65 326 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 FZD7O75084 574 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 ACVR1BP36896 505 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 RPL27P61353 136 aaKnown RBP24.04■■□□□ 1.44
MSX1-201ENST00000382723 POU3F1Q03052 451 aaPredicted RBP24.04■■□□□ 1.44
MSX1-201ENST00000382723 XAF1Q6GPH4 301 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 SHFQ7M4L6 423 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 ZADH2Q8N4Q0 377 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 TMIGD2Q96BF3 282 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 TAS2R16Q9NYV7 291 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 RAXQ9Y2V3 346 aa24.04■■□□□ 1.44
MSX1-201ENST00000382723 MRPS14O60783 128 aaKnown RBP24.03■■□□□ 1.44
MSX1-201ENST00000382723 PCMT1P22061 227 aa24.03■■□□□ 1.44
MSX1-201ENST00000382723 GPAT4Q86UL3 456 aa24.03■■□□□ 1.44
MSX1-201ENST00000382723 GGNQ86UU5 652 aa24.03■■□□□ 1.44
MSX1-201ENST00000382723 ARIH2OSQ8N7S6 290 aa24.03■■□□□ 1.44
MSX1-201ENST00000382723 OR52I1Q8NGK6 324 aa24.03■■□□□ 1.44
MSX1-201ENST00000382723 TMEM80Q96HE8 168 aa24.03■■□□□ 1.44
MSX1-201ENST00000382723 A6NHS1 94 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 ACOT7O00154 380 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 ARHGEF9O43307 516 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 ALDH3B2P48448 385 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms