RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 MAL2Q969L2 176 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 SLC25A36Q96CQ1 311 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 SLC47A1Q96FL8 570 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 ALKBH3Q96Q83 286 aaPredicted RBP11.33□□□□□ -0.6
RPAIN-202ENST00000381208 PTDSS2Q9BVG9 487 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 TMEM27Q9HBJ8 222 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 CCDC167Q9P0B6 97 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 MOKQ9UQ07 419 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 ST8SIA5O15466 376 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 RPS5P46782 204 aaKnown RBP11.32□□□□□ -0.6
RPAIN-202ENST00000381208 IDH3AP50213 366 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 CLDN17P56750 224 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 ROR2Q01974 943 aaKnown RBP11.32□□□□□ -0.6
RPAIN-202ENST00000381208 EGR4Q05215 589 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 SWI5Q1ZZU3 235 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 TMEM249Q2WGJ8 235 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 CHRFAM7AQ494W8 412 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 ALG10BQ5I7T1 473 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 H1FNTQ75WM6 255 aaPredicted RBP11.32□□□□□ -0.6
RPAIN-202ENST00000381208 SNX32Q86XE0 403 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 GPR137CQ8N3F9 429 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 ZNF540Q8NDQ6 660 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 DYDC1Q8WWB3 177 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 KTI12Q96EK9 354 aaPredicted RBP11.32□□□□□ -0.6
RPAIN-202ENST00000381208 ATP6V1G3Q96LB4 118 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 CA10Q9NS85 328 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 TMEM160Q9NX00 188 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 CDC42EP3Q9UKI2 254 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 ADAM21Q9UKJ8 722 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 DNHD1Q96M86 4753 aa11.32□□□□□ -0.6
RPAIN-202ENST00000381208 A0A096LNT2 108 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 IGHV1-18A0A0C4DH31 117 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 A0A1B0GWA3 101 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 NR5A2O00482 541 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 UPK3AO75631 287 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 ZNF432O94892 652 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 IGKV3-15P01624 115 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 IGLV1-44P01699 117 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 GPX2P18283 190 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 USF1P22415 310 aaPredicted RBP11.31□□□□□ -0.6
RPAIN-202ENST00000381208 ARR3P36575 388 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 SERPINF1P36955 418 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 PDLIM4P50479 330 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 RGS8P57771 180 aaPredicted RBP11.31□□□□□ -0.6
RPAIN-202ENST00000381208 NAAAQ02083 359 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 RBBP4Q09028 425 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 SCARB2Q14108 478 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 SQLEQ14534 574 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 EFNB3Q15768 340 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 CXXC5Q7LFL8 322 aaKnown RBP11.31□□□□□ -0.6
RPAIN-202ENST00000381208 RANBP3LQ86VV4 465 aaPredicted RBP11.31□□□□□ -0.6
RPAIN-202ENST00000381208 FUNDC1Q8IVP5 155 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 ZNF525Q8N782 197 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 SCAIQ8N9R8 606 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 HIPK4Q8NE63 616 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 NUP37Q8NFH4 326 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 NFKBIDQ8NI38 313 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 C10orf105Q8TEF2 133 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 ASPNQ9BXN1 380 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 SLC25A37Q9NYZ2 338 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 ANGPT4Q9Y264 503 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 RTTNQ86VV8 2226 aa11.31□□□□□ -0.6
RPAIN-202ENST00000381208 A0A087WUJ7 227 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 HMGB1P1B2RPK0 211 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-202ENST00000381208 M0R082 166 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 FMO6PO60774 539 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 ERCC1P07992 297 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-202ENST00000381208 CBR1P16152 277 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 GRPRP30550 384 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 GZMKP49863 264 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 AQP5P55064 265 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 HOXC5Q00444 222 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 TTMPQ5BVD1 217 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 C6orf52Q5T4I8 152 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 CYB5R2Q6BCY4 276 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 SLC30A8Q8IWU4 369 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 UEVLDQ8IX04 471 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 MSRB3Q8IXL7 192 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 TAAR8Q969N4 342 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 LRR1Q96L50 414 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-202ENST00000381208 MDFIQ99750 246 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 PIMREGQ9BSJ6 248 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 ZNF442Q9H7R0 627 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 SLCO1B3Q9NPD5 702 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 B3GAT2Q9NPZ5 323 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 VAPAQ9P0L0 249 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 B3GAT1Q9P2W7 334 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-202ENST00000381208 LEF1Q9UJU2 399 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-202ENST00000381208 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 USP22Q9UPT9 525 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 CR1P17927 2039 aa11.3□□□□□ -0.6
RPAIN-202ENST00000381208 TRBV5-3A0A0A0MS03 114 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 A0A0B4J2E0 115 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 A0A1B0GX12 115 aa11.29□□□□□ -0.6
RPAIN-202ENST00000381208 LOC390937A0A1W2PQ73 354 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms