RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 DUS3LQ96G46 650 aaKnown RBP16.59■□□□□ 0.25
SSU72-203ENST00000378725 SPOCK3Q9BQ16 436 aa16.59■□□□□ 0.25
SSU72-203ENST00000378725 PRSS50Q9UI38 385 aa16.59■□□□□ 0.25
SSU72-203ENST00000378725 TMEM5Q9Y2B1 443 aa16.59■□□□□ 0.25
SSU72-203ENST00000378725 EFCAB9A8MZ26 197 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 BLOC1S5-TXNDC5H3BN57 136 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 TRAF3IP2O43734 574 aaPredicted RBP16.58■□□□□ 0.24
SSU72-203ENST00000378725 CIB2O75838 187 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 ZNF432O94892 652 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 AHCYP23526 432 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 UQCRC1P31930 480 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 SLC9A3P48764 834 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 SORDQ00796 357 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 FHL1Q13642 323 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 C1DQ13901 141 aaKnown RBP16.58■□□□□ 0.24
SSU72-203ENST00000378725 CCNIQ14094 377 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 ANKDD1AQ495B1 522 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 FBXW9Q5XUX1 488 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 Q6ZT83 130 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 NANOGNBQ7Z5D8 188 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 KIF18BQ86Y91 864 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 DMRTC2Q8IXT2 367 aaPredicted RBP16.58■□□□□ 0.24
SSU72-203ENST00000378725 YY1AP1Q9H869 796 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 TMCC3Q9ULS5 477 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 RCE1Q9Y256 329 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 HIF3AQ9Y2N7 669 aa16.58■□□□□ 0.24
SSU72-203ENST00000378725 MPDZO75970 2070 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 C11orf98E9PRG8 122 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 TNFRSF11BO00300 401 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 CDC42EP2O14613 210 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 KLF4O43474 513 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 FKBP6O75344 327 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 POU2F1P14859 743 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 PEX19P40855 299 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 AQP2P41181 271 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 CLDN17P56750 224 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 RPS4XP62701 263 aaKnown RBP16.57■□□□□ 0.24
SSU72-203ENST00000378725 IL1RL1Q01638 556 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 RPL18Q07020 188 aaKnown RBP16.57■□□□□ 0.24
SSU72-203ENST00000378725 GK3PQ14409 553 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 LAPTM4AQ15012 233 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 EXOC3L2Q2M3D2 409 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 CASP12Q6UXS9 341 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.57■□□□□ 0.24
SSU72-203ENST00000378725 ZER1Q7Z7L7 766 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 MEX3DQ86XN8 651 aaKnown RBP16.57■□□□□ 0.24
SSU72-203ENST00000378725 ANKK1Q8NFD2 765 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 KRCC1Q9NPI7 259 aaPredicted RBP16.57■□□□□ 0.24
SSU72-203ENST00000378725 VNN3Q9NY84 501 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 LRRK2Q5S007 2527 aa16.57■□□□□ 0.24
SSU72-203ENST00000378725 INTS1Q8N201 2190 aaKnown RBP16.57■□□□□ 0.24
SSU72-203ENST00000378725 BAHCC1Q9P281 2608 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 RNF13O43567 381 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 PTP4A3O75365 173 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 ADAP00813 363 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 CST1P01037 141 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 SAGP10523 405 aaPredicted RBP16.56■□□□□ 0.24
SSU72-203ENST00000378725 COL8A1P27658 744 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 UGT2B10P36537 528 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 GPR4P46093 362 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 SELENOPP49908 381 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 ERFP50548 548 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 POU3F1Q03052 451 aaPredicted RBP16.56■□□□□ 0.24
SSU72-203ENST00000378725 P2RY6Q15077 328 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 TSPO2Q5TGU0 170 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 C1orf94Q6P1W5 598 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 NIPAL3Q6P499 406 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 STAC2Q6ZMT1 411 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 OAFQ86UD1 273 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 LINC00471Q8N535 108 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 LRRC75AQ8NAA5 344 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 MOSPD2Q8NHP6 518 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 FAM46AQ96IP4 442 aaKnown RBP16.56■□□□□ 0.24
SSU72-203ENST00000378725 RSRC1Q96IZ7 334 aaKnown RBP16.56■□□□□ 0.24
SSU72-203ENST00000378725 TXNDC15Q96J42 360 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 TNFRSF13CQ96RJ3 184 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 GPA33Q99795 319 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 REEP1Q9H902 201 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 GPR52Q9Y2T5 361 aa16.56■□□□□ 0.24
SSU72-203ENST00000378725 OR6C65A6NJZ3 312 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 C16orf97H3BN30 126 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 PDLIM1O00151 329 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 PSMB1P20618 241 aaKnown RBP16.55■□□□□ 0.24
SSU72-203ENST00000378725 IFNGR2P38484 337 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 ACTR3P61158 418 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 ZBED5Q49AG3 693 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 ZNF770Q6IQ21 691 aaPredicted RBP16.55■□□□□ 0.24
SSU72-203ENST00000378725 TMEM123Q8N131 208 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 POMGNT2Q8NAT1 580 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 OR13C2Q8NGS9 318 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 OR2M2Q96R28 347 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 HDHD5Q9BXW7 423 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 LINC00470Q9BZP3 86 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 OR10A4Q9H209 315 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 SLCO5A1Q9H2Y9 848 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 INIPQ9NRY2 104 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 SLC7A10Q9NS82 523 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 ARMC1Q9NVT9 282 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 MED29Q9NX70 200 aa16.55■□□□□ 0.24
SSU72-203ENST00000378725 MALT1Q9UDY8 824 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms