RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ARHGAP11BQ3KRB8 267 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 SPATS1Q496A3 300 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 SPINK14Q6IE38 97 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 SSX6Q7RTT6 188 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 NRARPQ7Z6K4 114 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 SLC35F2Q8IXU6 374 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 PARP16Q8N5Y8 322 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TOR1AIP2Q8NFQ8 470 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TXNDC15Q96J42 360 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 NEDD4LQ96PU5 975 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 S100A13Q99584 98 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 EDEM2Q9BV94 578 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 DUSP21Q9H596 190 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 DUSP22Q9NRW4 184 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 KLHL9Q9P2J3 617 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 OSGIN1Q9UJX0 560 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 PADI1Q9ULC6 663 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TICRRQ7Z2Z1 1910 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 TNRC18O15417 2968 aaPredicted RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 H0YJX3 145 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 DCTN6O00399 190 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 WISP1O95388 367 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SLC34A2O95436 690 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 NGFRP08138 427 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SYPP08247 313 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 HOXD12P35452 270 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 RNF4P78317 190 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SIRPAP78324 504 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 FOXF1Q12946 379 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 PDCD1Q15116 288 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 STK11Q15831 433 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 CTF1Q16619 201 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 MOGQ16653 247 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 CEP78Q5JTW2 689 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 NKAPLQ5M9Q1 402 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 CROCCP3Q8IVE0 287 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 PTPMT1Q8WUK0 201 aaPredicted RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 ROBO4Q8WZ75 1007 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 DERL3Q96Q80 235 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SPATA9Q9BWV2 254 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 WDR12Q9GZL7 423 aaKnown RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 DEFB127Q9H1M4 99 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 RNF121Q9H920 327 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 ELOVL3Q9HB03 270 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 OR6C68A6NDL8 312 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 NPIPA2E9PIF3 369 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 NPIPA3F8WFD2 350 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 PRICKLE3O43900 615 aaPredicted RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 HCKP08631 526 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 PRKAR1BP31321 381 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 RCVRNP35243 200 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 HSD17B7P56937 341 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 C19orf57Q0VDD7 668 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 EIF2B1Q14232 305 aaKnown RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 ACKR1Q16570 336 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SLX4IPQ5VYV7 408 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 STEAP3Q658P3 488 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 USP51Q70EK9 711 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 OR2AJ1Q8NGZ0 328 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SETD6Q8TBK2 473 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF845Q96IR2 970 aaPredicted RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 OPALINQ96PE5 141 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 ALKBH3Q96Q83 286 aaPredicted RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 TMA7Q9Y2S6 64 aaKnown RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 EMC9Q9Y3B6 208 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 A6NCN8 305 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SLC22A31A6NKX4 558 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 TAF4O00268 1085 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 TNFSF15O95150 251 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 THY1P04216 161 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 H2BFMP0C1H6 154 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 DPP4P27487 766 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 PER3P56645 1201 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 CLDN17P56750 224 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 HSD17B12Q53GQ0 312 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 MEPCEQ7L2J0 689 aaKnown RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SLC46A3Q7Z3Q1 461 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 FAM219AQ8IW50 185 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 TMEM105Q8N8V8 129 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 GOT1L1Q8NHS2 421 aaPredicted RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SFXN5Q8TD22 340 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 TAAR8Q969N4 342 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 TMEM106AQ96A25 262 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 TMCO6Q96DC7 493 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 THOC3Q96J01 351 aaKnown RBP7.38□□□□□ -1.23
CKAP2-203ENST00000378037 RBP7Q96R05 134 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 DUSP23Q9BVJ7 150 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 LYRM4Q9HD34 91 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 TRPV5Q9NQA5 729 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 ZC4H2Q9NQZ6 224 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SERINC1Q9NRX5 453 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 C14orf105Q9NVL8 296 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 SLC35A3Q9Y2D2 325 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 LOXL2Q9Y4K0 774 aa7.38□□□□□ -1.23
CKAP2-203ENST00000378037 DMXL2Q8TDJ6 3036 aa7.37□□□□□ -1.23
CKAP2-203ENST00000378037 IGHV5-10-1A0A0J9YXX1 117 aa7.37□□□□□ -1.23
CKAP2-203ENST00000378037 NUDT21O43809 227 aaKnown RBP7.37□□□□□ -1.23
CKAP2-203ENST00000378037 ZFAND5O76080 213 aa7.37□□□□□ -1.23
CKAP2-203ENST00000378037 STK17BO94768 372 aa7.37□□□□□ -1.23
CKAP2-203ENST00000378037 P04436 131 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms