RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 OR6M1Q8NGM8 313 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 OR6N1Q8NGY5 312 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 FAM3DQ96BQ1 224 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 PTGES2Q9H7Z7 377 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 LUZP4Q9P127 313 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 C19orf25Q9UFG5 118 aaPredicted RBP8.1□□□□□ -1.11
PCDH9-202ENST00000377865 SERINC4A6NH21 518 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 B4GALT3O60512 393 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 PRKRAO75569 313 aaKnown RBP8.1□□□□□ -1.11
PCDH9-202ENST00000377865 NID1P14543 1247 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 ZNF84P51523 738 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 ELOCQ15369 112 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 MANEAQ5SRI9 462 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 CHRDL2Q6WN34 429 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 SSX6Q7RTT6 188 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 GRAMD2AQ8IUY3 354 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 LNX2Q8N448 690 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 LMNTD1Q8N9Z9 388 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 SLC35A4Q96G79 324 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 SLC25A44Q96H78 314 aaPredicted RBP8.1□□□□□ -1.11
PCDH9-202ENST00000377865 KCNJ16Q9NPI9 418 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 SLC2A4RGQ9NR83 387 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 SMCO4Q9NRQ5 59 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 UBQLN4Q9NRR5 601 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 RNF215Q9Y6U7 377 aa8.1□□□□□ -1.11
PCDH9-202ENST00000377865 TMEM72A0PK05 275 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 ZNF850A8MQ14 1090 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 TMPRSS11DO60235 418 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 RBMXL2O75526 392 aaKnown RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 EPXP11678 715 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 CCL5P13501 91 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 PRSS58Q8IYP2 241 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 C9orf62Q8N4C0 152 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 ZNF764Q96H86 408 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 NMNAT3Q96T66 252 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SPIN2AQ99865 258 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SPIN2BQ9BPZ2 258 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 MIXL1Q9H2W2 232 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 ISG20L2Q9H9L3 353 aaKnown RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 PDE7BQ9NP56 450 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SAGE1Q9NXZ1 904 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 CLDND1Q9NY35 253 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 PTPRFP10586 1907 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 A0A0A6YYD5 115 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 PRSS38A1L453 326 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 VSTM2BA6NLU5 285 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 IFITM5A6NNB3 132 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 CTDSPLO15194 276 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SHOXO15266 292 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 GSTZ1O43708 216 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SELENOFO60613 162 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 CD22P20273 847 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 ECI1P42126 302 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 PPA1Q15181 289 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 ZNF529Q6P280 563 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 CLRN3Q8NCR9 226 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 MIB2Q96AX9 1013 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 DLL4Q9NR61 685 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SERTAD3Q9UJW9 196 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 C19orf53Q9UNZ5 99 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 RALGAPA2Q2PPJ7 1873 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SIP14410 1827 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 ACSM4P0C7M7 580 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SLC6A1P30531 599 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 P2RY2P41231 377 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 RABIFP47224 123 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 PLA2G7Q13093 441 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 EMC4Q5J8M3 183 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 CD163Q86VB7 1156 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 ZNF595Q8IYB9 648 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 ZNF679Q8IYX0 411 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 TSACCQ96A04 125 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 TMEM106AQ96A25 262 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 PRR14Q9BWN1 585 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 PLA2G12AQ9BZM1 189 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 FANCFQ9NPI8 374 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 EXOSC3Q9NQT5 275 aaKnown RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 FAM86C1Q9NVL1 165 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 IL20Q9NYY1 176 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 HCSTQ9UBK5 93 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 REV1Q9UBZ9 1251 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 RAB22AQ9UL26 194 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SLC7A11Q9UPY5 501 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 LSM5Q9Y4Y9 91 aaKnown RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 H3BUI4 141 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 PLPP2O43688 288 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 CRTAPO75718 401 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 KLF8O95600 359 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 OR8U9P0C7N5 309 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 CEBPBP17676 345 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 DIO1P49895 249 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 HCCSP53701 268 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 DCAF7P61962 342 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 NKX6-1P78426 367 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-202ENST00000377865 GSG1Q2KHT4 349 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 ACOT7LQ6ZUV0 252 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 SIRT6Q8N6T7 355 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 EDAQ92838 391 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 WBP2Q969T9 261 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 OR52A5Q9H2C5 316 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms