RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 UBE2NP61088 152 aaKnown RBP16.69■□□□□ 0.26
CBWD3-204ENST00000377349 TUBA1BP68363 451 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 TUBA4AP68366 448 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 EGR4Q05215 589 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 SELPLGQ14242 412 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 C1QTNF12Q5T7M4 302 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 CYB5R2Q6BCY4 276 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 DHRS4L2Q6PKH6 230 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 TUBA1AQ71U36 451 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 RANBP3LQ86VV4 465 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-204ENST00000377349 EPHX4Q8IUS5 362 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 ZNF417Q8TAU3 575 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 TAAR8Q969N4 342 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 SORCS2Q96PQ0 1159 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 ZNF587Q96SQ5 575 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-204ENST00000377349 TMEM45AQ9NWC5 275 aa16.69■□□□□ 0.26
CBWD3-204ENST00000377349 TESQ9UGI8 421 aaKnown RBP16.69■□□□□ 0.26
CBWD3-204ENST00000377349 M0R3H8 397 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 AIM2O14862 343 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 EDF1O60869 148 aaKnown RBP16.68■□□□□ 0.26
CBWD3-204ENST00000377349 UPK3AO75631 287 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 SERPINI2O75830 405 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 GPX2P18283 190 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 GRPRP30550 384 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 CHRNB3Q05901 458 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 CARD17Q5XLA6 110 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 ULK3Q6PHR2 472 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 DLEU7Q6UYE1 221 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 C11orf65Q8NCR3 313 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 VANGL1Q8TAA9 524 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-204ENST00000377349 DNAJA4Q8WW22 397 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-204ENST00000377349 SLC35B4Q969S0 331 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 KCNS3Q9BQ31 491 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 RSPO3Q9BXY4 272 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-204ENST00000377349 BEX2Q9BXY8 128 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 PIF1Q9H611 641 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 TMEM38AQ9H6F2 299 aa16.68■□□□□ 0.26
CBWD3-204ENST00000377349 TRAV36DV7A0A075B6V5 113 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 IGHV1-18A0A0C4DH31 117 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 SLC35F4A4IF30 521 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 FTCDNL1E5RQL4 147 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 H2AFXP16104 143 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-204ENST00000377349 LSM11P83369 360 aaKnown RBP eCLIP16.67■□□□□ 0.26
CBWD3-204ENST00000377349 ROR2Q01974 943 aaKnown RBP16.67■□□□□ 0.26
CBWD3-204ENST00000377349 OR1Q1Q15612 314 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 ADRM1Q16186 407 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 TBRG1Q3YBR2 411 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 RUNDC3AQ59EK9 446 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 FAM69AQ5T7M9 428 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 LINGO2Q7L985 606 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 OR1K1Q8NGR3 316 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 SLC47A1Q96FL8 570 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 CGREF1Q99674 301 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 LPAR3Q9UBY5 353 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 PRDM4Q9UKN5 801 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 PMF1-BGLAPU3KQ54 211 aa16.67■□□□□ 0.26
CBWD3-204ENST00000377349 OR2T1O43869 369 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 LMX1BO60663 402 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 SLC43A1O75387 559 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 SASH3O75995 380 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 THBS2P35442 1172 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 CAPZA2P47755 286 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 RETREG3Q86VR2 466 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 GPR137CQ8N3F9 429 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 LSMEM1Q8N8F7 131 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 SLC26A7Q8TE54 656 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 FBXO17Q96EF6 278 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 ANKRD27Q96NW4 1050 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 WFDC6Q9BQY6 131 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 TMEM120AQ9BXJ8 343 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 SHARPINQ9H0F6 387 aa16.66■□□□□ 0.26
CBWD3-204ENST00000377349 IGKV1D-42A0A075B6H8 117 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 CPSF4LA6NMK7 179 aaKnown RBP16.65■□□□□ 0.26
CBWD3-204ENST00000377349 SEC14L2O76054 403 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 BMP4P12644 408 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 NR4A2P43354 598 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 SRSF2Q01130 221 aaKnown RBP16.65■□□□□ 0.26
CBWD3-204ENST00000377349 C6orf89Q6UWU4 347 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 PTOV1Q86YD1 416 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 BHLHE22Q8NFJ8 381 aaPredicted RBP16.65■□□□□ 0.26
CBWD3-204ENST00000377349 MSI2Q96DH6 328 aaKnown RBP16.65■□□□□ 0.26
CBWD3-204ENST00000377349 OXGR1Q96P68 337 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 EPYCQ99645 322 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 MCHR1Q99705 422 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 ASPNQ9BXN1 380 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 NELFAQ9H3P2 528 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 C12orf10Q9HB07 376 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 KLHL14Q9P2G3 628 aa16.65■□□□□ 0.26
CBWD3-204ENST00000377349 IGHV4-61A0A0C4DH41 118 aa16.64■□□□□ 0.25
CBWD3-204ENST00000377349 OR6C65A6NJZ3 312 aa16.64■□□□□ 0.25
CBWD3-204ENST00000377349 AKAP8O43823 692 aaKnown RBP16.64■□□□□ 0.25
CBWD3-204ENST00000377349 GZMKP49863 264 aa16.64■□□□□ 0.25
CBWD3-204ENST00000377349 PDLIM4P50479 330 aa16.64■□□□□ 0.25
CBWD3-204ENST00000377349 CDH12P55289 794 aa16.64■□□□□ 0.25
CBWD3-204ENST00000377349 POU3F1Q03052 451 aaPredicted RBP16.64■□□□□ 0.25
CBWD3-204ENST00000377349 FAM91A1Q658Y4 838 aa16.64■□□□□ 0.25
CBWD3-204ENST00000377349 VHLLQ6RSH7 139 aa16.64■□□□□ 0.25
CBWD3-204ENST00000377349 C5orf46Q6UWT4 87 aa16.64■□□□□ 0.25
CBWD3-204ENST00000377349 IL17RELQ6ZVW7 336 aa16.64■□□□□ 0.25
CBWD3-204ENST00000377349 H1FNTQ75WM6 255 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms