RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 KLHL26Q53HC5 615 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 ZNF440Q8IYI8 595 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 SYNPRQ8TBG9 265 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 NXPE2Q96DL1 559 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 S100A16Q96FQ6 103 aaKnown RBP23.07■■□□□ 1.28
C9orf40-201ENST00000376854 MED30Q96HR3 178 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 ZNF436Q9C0F3 470 aaPredicted RBP23.07■■□□□ 1.28
C9orf40-201ENST00000376854 OR10A4Q9H209 315 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 KLK11Q9UBX7 282 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 OR5V1Q9UGF6 321 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 TMEM72A0PK05 275 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 PRKNO60260 465 aaPredicted RBP23.06■■□□□ 1.28
C9orf40-201ENST00000376854 KHDRBS3O75525 346 aaKnown RBP23.06■■□□□ 1.28
C9orf40-201ENST00000376854 TACSTD2P09758 323 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 SSTR2P30874 369 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 PTH2RP49190 550 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 SKP1P63208 163 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 FUT7Q11130 342 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.06■■□□□ 1.28
C9orf40-201ENST00000376854 STPG1Q5TH74 334 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 SLC16A9Q7RTY1 509 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 FAM220AQ7Z4H9 259 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 LMF1Q96S06 567 aa23.06■■□□□ 1.28
C9orf40-201ENST00000376854 EIF3KQ9UBQ5 218 aaKnown RBP23.06■■□□□ 1.28
C9orf40-201ENST00000376854 NAP1L6A6NFF2 107 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 TGM6O95932 706 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 IFNA16P05015 189 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 VEGFCP49767 419 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 SELENOPP49908 381 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 ZNF74Q16587 644 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 TMEM69Q5SWH9 247 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 WBP2NLQ6ICG8 309 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 FAM122BQ7Z309 247 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 CCDC28AQ8IWP9 274 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 PIGKQ92643 395 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 ADAD1Q96M93 576 aaKnown RBP23.05■■□□□ 1.28
C9orf40-201ENST00000376854 METTL17Q9H7H0 456 aaPredicted RBP23.05■■□□□ 1.28
C9orf40-201ENST00000376854 TCF7L1Q9HCS4 588 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 NANSQ9NR45 359 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 CD207Q9UJ71 328 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 FOXJ3Q9UPW0 622 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 HIF3AQ9Y2N7 669 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 KLHDC2Q9Y2U9 406 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 NPTNQ9Y639 398 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.05■■□□□ 1.28
C9orf40-201ENST00000376854 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.05■■□□□ 1.28
C9orf40-201ENST00000376854 LINC00862A6NCI5 91 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 PRAMEF26H0Y7S4 382 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 PRAF2O60831 178 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 TMEM127O75204 238 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 CD14P08571 375 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 CTSEP14091 401 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 CCR4P51679 360 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 SLC25A1P53007 311 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 PWWP2BQ6NUJ5 590 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 EID2Q8N6I1 236 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 LSM14AQ8ND56 463 aaKnown RBP23.05■■□□□ 1.28
C9orf40-201ENST00000376854 OR2T35Q8NGX2 323 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 C1orf216Q8TAB5 229 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 MAP6Q96JE9 813 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 MOGAT1Q96PD6 335 aa23.05■■□□□ 1.28
C9orf40-201ENST00000376854 DPCDQ9BVM2 203 aaPredicted RBP23.05■■□□□ 1.28
C9orf40-201ENST00000376854 IGHV4-34P06331 123 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 PNMTP11086 282 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 CTXN1P60606 82 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 ALG10Q5BKT4 473 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 ELFN2Q5R3F8 820 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 APOOLQ6UXV4 268 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 STAC2Q6ZMT1 411 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 Q6ZTK2 550 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 NLRC3Q7RTR2 1065 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 KCTD20Q7Z5Y7 419 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 ZNF615Q8N8J6 731 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 OR5AK2Q8NH90 309 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 SLITRK2Q9H156 845 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 MRM2Q9UI43 246 aaKnown RBP23.04■■□□□ 1.28
C9orf40-201ENST00000376854 BLACEA4D250 179 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 SULT1B1O43704 296 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 UPK3AO75631 287 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 RAB40ALP0C0E4 278 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 NUDT1P36639 197 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 CD226Q15762 336 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 Q499Y3 187 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 LIPNQ5VXI9 398 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 ATG4DQ86TL0 474 aaPredicted RBP23.04■■□□□ 1.28
C9orf40-201ENST00000376854 EXD3Q8N9H8 876 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 ZDHHC1Q8WTX9 485 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 RAB40AQ8WXH6 277 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 ZNF578Q96N58 590 aaPredicted RBP23.04■■□□□ 1.28
C9orf40-201ENST00000376854 MRI1Q9BV20 369 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 CLEC4MQ9H2X3 399 aaPredicted RBP23.04■■□□□ 1.28
C9orf40-201ENST00000376854 MOKQ9UQ07 419 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 SLCO1B1Q9Y6L6 691 aa23.04■■□□□ 1.28
C9orf40-201ENST00000376854 GON4LQ3T8J9 2241 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 B4DGG1 531 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 OIP5O43482 229 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 TOXO94900 526 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 CALCBP10092 127 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 SOX2P48431 317 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 RPL6Q02878 288 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms