RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 MS4A4EQ96PG1 132 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 SLC25A22Q9H936 323 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ZFP14Q9HCL3 533 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 KCNIP1Q9NZI2 227 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PISDQ9UG56 409 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ASF1AQ9Y294 204 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PHF3Q92576 2039 aaKnown RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 IGLV3-22A0A075B6J6 115 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 A0A1W2PPE3 182 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 A0A1W2PPV9 198 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PSMB11A5LHX3 300 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 E9PBE3 544 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF861PO60384 105 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 TNFSF13O75888 250 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 GIPP09681 153 aaPredicted RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ABOP16442 354 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 GDI1P31150 447 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 HNRNPH3P31942 346 aaKnown RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 CASP14P31944 242 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ARRB1P49407 418 aaPredicted RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ATP5IP56385 69 aaPredicted RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 TAS2R19P59542 299 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PPIL2Q13356 520 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ATP6AP1Q15904 470 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 CCDC14Q49A88 953 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 KDM7AQ6ZMT4 941 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF620Q6ZNG0 422 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF546Q86UE3 836 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 FAM228AQ86W67 206 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PAQR7Q86WK9 346 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 MFSD6LQ8IWD5 586 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PNKDQ8N490 385 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 DCAF4L2Q8NA75 395 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 FNDC5Q8NAU1 212 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 OR4F6Q8NGB9 312 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 OR6C4Q8NGE1 309 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 NEIL3Q8TAT5 605 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 UCN3Q969E3 161 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 IMMP1LQ96LU5 166 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 KCNA7Q96RP8 456 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 RIOK1Q9BRS2 568 aaKnown RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PKIBQ9C010 78 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 NIPAL2Q9H841 368 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 NT5MQ9NPB1 228 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 GIN1Q9NXP7 522 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 QPCTLQ9NXS2 382 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 KLHL28Q9NXS3 571 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 MTRF1LQ9UGC7 380 aaKnown RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 NEU3Q9UQ49 428 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 CDH10Q9Y6N8 788 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PLEKHG1Q9ULL1 1385 aa1.4□□□□□ -2.18
VPS13A-206ENST00000376646 NACAE9PAV3 2078 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PPIAL4EA0A075B759 164 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 A0A0U1RQS6 177 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 CCDC169A6NNP5 214 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 NPIPB7O75200 414 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 CIB2O75838 187 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 OR7A10O76100 309 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 C1orf105O95561 183 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 KLF8O95600 359 aaPredicted RBP1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PPIAL4FP0DN26 164 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 SLC2A5P22732 501 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 HTR1EP28566 365 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 FMO3P31513 532 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 BST2Q10589 180 aaKnown RBP1.4□□□□□ -2.19
VPS13A-206ENST00000376646 GNMTQ14749 295 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 ZNF77Q15935 545 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 SSX2Q16385 188 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 NRF1Q16656 503 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 DGUOKQ16854 277 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 GPR157Q5UAW9 335 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 RNF165Q6ZSG1 346 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 CDR2LQ86X02 465 aaPredicted RBP1.4□□□□□ -2.19
VPS13A-206ENST00000376646 RALGPS2Q86X27 583 aaPredicted RBP1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PLA2G4DQ86XP0 818 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PSTKQ8IV42 348 aaKnown RBP1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PIANPQ8IYJ0 282 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 OR56B2PQ8NGI1 322 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PYROXD1Q8WU10 500 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 TM4SF19Q96DZ7 209 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PELOQ9BRX2 385 aaKnown RBP1.4□□□□□ -2.19
VPS13A-206ENST00000376646 GBA3Q9H227 469 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 SIAEQ9HAT2 523 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 LY9Q9HBG7 655 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PLGRKTQ9HBL7 147 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 NMRK1Q9NWW6 199 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 IKZF2Q9UKS7 526 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PEX16Q9Y5Y5 336 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 ARHGAP23Q9P227 1491 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 GOLGA8OA6NCC3 632 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 ZNF716A6NP11 495 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 GOLGA8NF8WBI6 632 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 PSTPIP1O43586 416 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 TRAF3IP2O43734 574 aaPredicted RBP1.4□□□□□ -2.19
VPS13A-206ENST00000376646 FAM189A1O60320 539 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 UPK3AO75631 287 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 TMEM50AO95807 157 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 CST1P01037 141 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 IGLV1-47P01700 117 aa1.4□□□□□ -2.19
VPS13A-206ENST00000376646 CT62P0C5K7 136 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms