RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 MACROD1Q9BQ69 325 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 TMPRSS5Q9H3S3 457 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 MED17Q9NVC6 651 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 CXorf51AA0A1B0GTR3 108 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 PLPP2O43688 288 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 C1orf105O95561 183 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 MT-ND5P03915 603 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 RLN1P04808 185 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 DCNP07585 359 aaKnown RBP11.16□□□□□ -0.62
C9orf3-203ENST00000375315 STARD6P59095 220 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 PFN3P60673 137 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 TBPL1P62380 186 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 SMAD4Q13485 552 aaKnown RBP11.16□□□□□ -0.62
C9orf3-203ENST00000375315 C2orf68Q2NKX9 166 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 DCAF12L2Q5VW00 463 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 TMEM71Q6P5X7 295 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 C11orf96Q7Z7L8 435 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.16□□□□□ -0.62
C9orf3-203ENST00000375315 KCNRGQ8N5I3 272 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 C15orf54Q8N8G6 183 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 TEX19Q8NA77 164 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 OR1J4Q8NGS1 313 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 LGALS14Q8TCE9 139 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 PATE1Q8WXA2 126 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 ACOT11Q8WXI4 607 aaPredicted RBP11.16□□□□□ -0.62
C9orf3-203ENST00000375315 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 ORAI3Q9BRQ5 295 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 PINK1Q9BXM7 581 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 TRAV1-2A0A0B4J238 106 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 DAPL1A0PJW8 107 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 H0YIV9 168 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 PYCARD-AS1I3L0S3 204 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 BCL2L11O43521 198 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 CLN5O75503 358 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 F12P00748 615 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-203ENST00000375315 FURINP09958 794 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 GKN3PP0CG01 181 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 VSIG10L2P0DP72 767 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 FAUP35544 74 aaKnown RBP11.15□□□□□ -0.62
C9orf3-203ENST00000375315 AHRP35869 848 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 MRPS10P82664 201 aaKnown RBP11.15□□□□□ -0.62
C9orf3-203ENST00000375315 SSX2Q16385 188 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 LNX2Q8N448 690 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 SIRT6Q8N6T7 355 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 MORN4Q8NDC4 146 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 RNASE11Q8TAA1 199 aaKnown RBP11.15□□□□□ -0.62
C9orf3-203ENST00000375315 GCDHQ92947 438 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-203ENST00000375315 NDC1Q9BTX1 674 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 APOOQ9BUR5 198 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 ALX4Q9H161 411 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-203ENST00000375315 PRO3102Q9H379 93 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 KLK11Q9UBX7 282 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 ARHGEF17Q96PE2 2063 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-203ENST00000375315 SURF4O15260 269 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 OR2F2O95006 317 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 TGFB1P01137 390 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 SPTBP11277 2137 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 OR2F1Q13607 317 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 GAS6Q14393 721 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 GRHL2Q6ISB3 625 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 FAAP20Q6NZ36 180 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 TBX5Q99593 518 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 KLHL42Q9P2K6 505 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 TAC3Q9UHF0 121 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 PLXNB3Q9ULL4 1909 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 CKAP5Q14008 2032 aa11.15□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF879B4DU55 563 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 M0R3H8 397 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 LILRB5O75023 590 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 IL3P08700 152 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 UCHL1P09936 223 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 SFTPCP11686 197 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 ZNF44P15621 663 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 ZNF14P17017 642 aaPredicted RBP11.15□□□□□ -0.63
C9orf3-203ENST00000375315 NFYBP25208 207 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 PAX6P26367 422 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 ACTR1BP42025 376 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 LSM11P83369 360 aaKnown RBP eCLIP11.15□□□□□ -0.63
C9orf3-203ENST00000375315 MC1RQ01726 317 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 TSPAN31Q12999 210 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 SLC36A1Q7Z2H8 476 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 MEX3DQ86XN8 651 aaKnown RBP11.15□□□□□ -0.63
C9orf3-203ENST00000375315 BBS1Q8NFJ9 593 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 OSTF1Q92882 214 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 SMAD5Q99717 465 aaKnown RBP11.15□□□□□ -0.63
C9orf3-203ENST00000375315 GABRG3Q99928 467 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 ZDHHC5Q9C0B5 715 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 SPAG17Q6Q759 2223 aa11.15□□□□□ -0.63
C9orf3-203ENST00000375315 FEZF1A0PJY2 475 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 SHISA7A6NL88 538 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 MCIDASD6RGH6 385 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 ARL6IP5O75915 188 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 LY86O95711 162 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 EML2O95834 649 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 LAP3P28838 519 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 RPS26P62854 115 aaKnown RBP11.14□□□□□ -0.63
C9orf3-203ENST00000375315 CXADRP78310 365 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 DPTQ07507 201 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 CCINQ13939 588 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms