RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 HIF3AQ9Y2N7 669 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 TRBV2A0A0J9YWF9 115 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 IMPA2O14732 288 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 SEC14L5O43304 696 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 CPNE3O75131 537 aaKnown RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 CD14P08571 375 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 ELK1P19419 428 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 CXCR1P25024 350 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 HTR3AP46098 478 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 GDI2P50395 445 aaKnown RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 OR10A3P58181 314 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 SFXN4Q6P4A7 337 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 POMZP3Q6PJE2 187 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 WDR74Q6RFH5 385 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 PXKQ7Z7A4 578 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 MARCH3Q86UD3 253 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 KMT5CQ86Y97 462 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 C9orf40Q8IXQ3 194 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 ZPLD1Q8TCW7 415 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 ZNRF4Q8WWF5 429 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 SMIM19Q96E16 107 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 RNF31Q96EP0 1072 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 GPX7Q96SL4 187 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 NUDT22Q9BRQ3 303 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 NDEL1Q9GZM8 345 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 VN1R1Q9GZP7 353 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 RPRD1BQ9NQG5 326 aaKnown RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 ENAMQ9NRM1 1142 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 EXTL2Q9UBQ6 330 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 GRHPRQ9UBQ7 328 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 ST6GALNAC2Q9UJ37 374 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 RASD1Q9Y272 281 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 RP1P56715 2156 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 A0A1W2PPK0 400 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 A0A1W2PQM1 296 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 FAM171A2A8MVW0 826 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 C1QTNF9BB2RNN3 333 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 OGG1O15527 345 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 GLCEO94923 617 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 F13BP05160 661 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 KRT8P05787 483 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 C1QTNF9P0C862 333 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 EDNRAP25101 427 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 MST1P26927 711 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 LCN1P31025 176 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 CDKN2AP42771 156 aaKnown RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 CCL7P80098 99 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF117Q03924 483 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 EGR4Q05215 589 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 IL10RAQ13651 578 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 CDK5R1Q15078 307 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 CDONQ4KMG0 1287 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 RSBN1Q5VWQ0 802 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 MZT2BQ6NZ67 158 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 SHISA6Q6ZSJ9 500 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 PRSS42Q7Z5A4 293 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 NANOGNBQ7Z5D8 188 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 LRRC28Q86X40 367 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 SAMD12Q8N8I0 201 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 OR1N1Q8NGS0 311 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 OR13C5Q8NGS8 318 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 CHAC2Q8WUX2 184 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 LIPHQ8WWY8 451 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 KTI12Q96EK9 354 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 DDOQ99489 341 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 SMAD5Q99717 465 aaKnown RBP10.99□□□□□ -0.65
HMGCL-202ENST00000374487 ALG12Q9BV10 488 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 NMNAT2Q9BZQ4 307 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 WWTR1Q9GZV5 400 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 SLC6A5Q9Y345 797 aa10.99□□□□□ -0.65
HMGCL-202ENST00000374487 PLA2G10O15496 165 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 SC5DO75845 299 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 ARL6IP5O75915 188 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 ASAH2BP0C7U1 165 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 PRKAR1AP10644 381 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 APEHP13798 732 aaKnown RBP10.98□□□□□ -0.65
HMGCL-202ENST00000374487 RAB3BP20337 219 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 SDHAP31040 664 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 RPS5P46782 204 aaKnown RBP10.98□□□□□ -0.65
HMGCL-202ENST00000374487 EFNA3P52797 238 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 YOD1Q5VVQ6 348 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-202ENST00000374487 RPL22L1Q6P5R6 122 aaKnown RBP10.98□□□□□ -0.65
HMGCL-202ENST00000374487 IL20RBQ6UXL0 311 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 LSM14AQ8ND56 463 aaKnown RBP10.98□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF501Q96CX3 271 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-202ENST00000374487 LPAR4Q99677 370 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 TTYH2Q9BSA4 534 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 ACOXLQ9NUZ1 547 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 SEMA5BQ9P283 1151 aa10.98□□□□□ -0.65
HMGCL-202ENST00000374487 PTPRBP23467 1997 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 MEIOCA2RUB1 952 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 SLC25A12O75746 678 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 GRPRP30550 384 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 HSF2Q03933 536 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 CCDC58Q4VC31 144 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 PLET1Q6UQ28 207 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 LYPD4Q6UWN0 246 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 TMPRSS7Q7RTY8 843 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 TEX19Q8NA77 164 aa10.97□□□□□ -0.65
HMGCL-202ENST00000374487 TAAR8Q969N4 342 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms