RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZNF736B4DX44 427 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 MT-ND4P03905 459 aa12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 CRABP1P29762 137 aa12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 RFC3P40938 356 aa12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 FASLGP48023 281 aa12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZNF169Q14929 603 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 NKPD1Q17RQ9 610 aa12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 TPRA1Q86W33 373 aa12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 RNF175Q8N4F7 328 aa12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZNF587Q96SQ5 575 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 LTB4R2Q9NPC1 389 aa12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 ABRACLQ9P1F3 81 aa12.36□□□□□ -0.43
RAPGEF1-201ENST00000372189 GABRB3P28472 473 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 C21orf33P30042 268 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 CCR2P41597 374 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 CNEP1R1Q8N9A8 125 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 EXD3Q8N9H8 876 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 PLPP5Q8NEB5 264 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 ATG12O94817 140 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 OR52H1Q8NGJ2 320 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 MRGPRX1Q96LB2 322 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 PRRT1Q99946 306 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 RASD1Q9Y272 281 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 YBX2Q9Y2T7 364 aaKnown RBP12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 AQP7O14520 342 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 IGLV3-27P01718 113 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 BDKRB2P30411 391 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 CALCRP30988 508 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 ACAA2P42765 397 aaKnown RBP12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 BDH1Q02338 343 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 KIAA0141Q14154 515 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 FCRLBQ6BAA4 426 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZMYND19Q96E35 227 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZNF75AQ96N20 296 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 DHCR7Q9UBM7 475 aaKnown RBP12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 LAMB2P55268 1798 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 SLCO2B1O94956 709 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 PDGFAP04085 211 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 ACP2P11117 423 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 SUMO1P63165 101 aaKnown RBP12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 Q6ZNX1 250 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 GLYATL2Q8WU03 294 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 LMF2Q9BU23 707 aaKnown RBP12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 SPHK1Q9NYA1 384 aa12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZNF443Q9Y2A4 671 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF1-201ENST00000372189 H0Y8X5 98 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 LILRB5O75023 590 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 ALDOCP09972 364 aaKnown RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 FUT1P19526 365 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 LACC1Q8IV20 430 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 VRK3Q8IV63 474 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 TMEM239Q8WW34 195 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZDHHC5Q9C0B5 715 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SMCO4Q9NRQ5 59 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 ACSS1Q9NUB1 689 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SYT7O43581 403 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 HES1Q14469 280 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 PRR27Q6MZM9 219 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZNF704Q6ZNC4 412 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 C1QTNF2Q9BXJ5 285 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 ARRDC1-AS1Q9H2J1 176 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 RPL7P18124 248 aaKnown RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 CCL11P51671 97 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 RAP2BP61225 183 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 BAMBIQ13145 260 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SELPLGQ14242 412 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 C1orf53Q5VUE5 145 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SGPP2Q8IWX5 399 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 CRISPLD2Q9H0B8 497 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 FGF22Q9HCT0 170 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SIDT1Q9NXL6 827 aaKnown RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 UBR3Q6ZT12 1888 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 K7ESM1 405 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 CTDSP2O14595 271 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZNF749O43361 778 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 HOXB9P17482 250 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SSTR2P30874 369 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 CDC34P49427 236 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SLC9A3R2Q15599 337 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 PYCR3Q53H96 274 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 WBP2NLQ6ICG8 309 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 FRMPD2BQ6IN97 320 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 C6orf15Q6UXA7 325 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 WWTR1Q9GZV5 400 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 MYH15Q9Y2K3 1946 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 TRAF3IP2O43734 574 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 GALR3O60755 368 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 RPL34P49207 117 aaKnown RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 POU3F4P49335 361 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 TAS2R20P59543 309 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 TGFBR3Q03167 851 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 Q6ZNB5 142 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 DNAJC5GQ8N7S2 189 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SLC37A2Q8TED4 501 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 NOL4LQ96MY1 436 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 C20orf27Q9GZN8 174 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 SLC38A1Q9H2H9 487 aa12.34□□□□□ -0.43
RAPGEF1-201ENST00000372189 V9GY05 133 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms