RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 MRPS28Q9Y2Q9 187 aaKnown RBP11.6□□□□□ -0.55
TMEM56-201ENST00000370203 CLDN1O95832 211 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 TESK1Q15569 626 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.559e-8■■■□□ 15
TMEM56-201ENST00000370203 SNAPC3Q92966 411 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 ATOH8Q96SQ7 321 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 MFFQ9GZY8 342 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 C1orf198Q9H425 327 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 PTTG3PQ9NZH4 202 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 CGGBP1Q9UFW8 167 aaPredicted RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 MCRIP1C9JLW8 97 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 GUSBP08236 651 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 DAPP51397 102 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 MC2RQ01718 297 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 CCDC88AQ3V6T2 1871 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 TRMT12Q53H54 448 aaKnown RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 NHSL2Q5HYW2 709 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 OGFOD3Q6PK18 319 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 ALKAL1Q6UXT8 129 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 IL34Q6ZMJ4 242 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 DCXRQ7Z4W1 244 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 OR5M9Q8NGP3 310 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 LCORQ96JN0 433 aaPredicted RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 OCSTAMPQ9BR26 566 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 PIGQQ9BRB3 760 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 FAM117AQ9C073 453 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 NOX4Q9NPH5 578 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 OSGIN1Q9UJX0 560 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 USP3Q9Y6I4 520 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 A3GALT2U3KPV4 340 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 CENPBD1B2RD01 187 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 GALR3O60755 368 aaPredicted RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 ERP29P30040 261 aaKnown RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 METTL4Q8N3J2 472 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 COA3Q9Y2R0 106 aaPredicted RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 C4BP0C0L5 1744 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 FGF4P08620 206 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 COQ5Q5HYK3 327 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 C9orf50Q5SZB4 431 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 SUMF2Q8NBJ7 301 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 BRIX1Q8TDN6 353 aaKnown RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 EMG1Q92979 244 aaKnown RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 MKRN2Q9H000 416 aaKnown RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 MYOTQ9UBF9 498 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 STEAP1Q9UHE8 339 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 RGPD5Q99666 1765 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 CHATP28329 748 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 ADPRHP54922 357 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 BTG2P78543 158 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 PDLIM3Q53GG5 364 aaPredicted RBP11.59□□□□□ -0.55
TMEM56-201ENST00000370203 OR4M1Q8NGD0 313 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 ZNF286AQ9HBT8 521 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 CSNK1G1Q9HCP0 422 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 IL37Q9NZH6 218 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 GPR160Q9UJ42 338 aa11.59□□□□□ -0.55
TMEM56-201ENST00000370203 PRRT4C9JH25 899 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 LGALS8O00214 317 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 TNFSF11O14788 317 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 GABRB3P28472 473 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 LIM2P55344 173 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 ARHGAP11BQ3KRB8 267 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 ANKLE1Q8NAG6 615 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 TRMT61AQ96FX7 289 aaKnown RBP11.58□□□□□ -0.55
TMEM56-201ENST00000370203 OR51J1Q9H342 316 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 ZNF696Q9H7X3 374 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 SPHK1Q9NYA1 384 aa11.58□□□□□ -0.55
TMEM56-201ENST00000370203 MYH15Q9Y2K3 1946 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 TNFRSF10AO00220 468 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 FOXE1O00358 373 aaPredicted RBP11.58□□□□□ -0.56
TMEM56-201ENST00000370203 B4GALT3O60512 393 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 PTHP01270 115 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 GCAP28676 217 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 RRADP55042 308 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 UBE2NLQ5JXB2 153 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 SLC22A25Q6T423 547 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 FAM71CQ8NEG0 241 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 GOT1L1Q8NHS2 421 aaPredicted RBP11.58□□□□□ -0.56
TMEM56-201ENST00000370203 ATP13A2Q9NQ11 1180 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.58□□□□□ -0.569e-7■■■■■ 32.8
TMEM56-201ENST00000370203 FAM221AA4D161 298 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 MAGEB4O15481 346 aaPredicted RBP11.58□□□□□ -0.56
TMEM56-201ENST00000370203 UPK1BO75841 260 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 SLC34A2O95436 690 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 EIF4EP06730 217 aaKnown RBP11.58□□□□□ -0.56
TMEM56-201ENST00000370203 RAB5BP61020 215 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 PRSS45Q7RTY3 260 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 VN1R2Q8NFZ6 395 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 FGF22Q9HCT0 170 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 TMX2-CTNND1H3BSU7 103 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 SOCS7O14512 581 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 YIF1AO95070 293 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 BMP2P12643 396 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 ICAM2P13598 275 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 CD1CP29017 333 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 NDUFA6P56556 154 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 MFAP5Q13361 173 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 LGALS14Q8TCE9 139 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 BABAM2Q9NXR7 383 aa11.58□□□□□ -0.56
TMEM56-201ENST00000370203 FZR1Q9UM11 496 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms