RNA–Protein interactions for RNA: ENST00000369774.8

SH3PXD2A-203, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SH3PXD2A, Length 11,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-203ENST00000369774 ACP2P11117 423 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 HLA-FP30511 346 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 CPNE5Q9HCH3 593 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ARID1AO14497 2285 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 IGKV6-21A0A0C4DH24 114 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 MISPQ8IVT2 679 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TMEM178AQ8NBL3 297 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ASB11Q8WXH4 323 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 GJA4P35212 333 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 LSAMPQ13449 338 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 OR56B4Q8NH76 319 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 GIMAP1Q8WWP7 306 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 QRSL1Q9H0R6 528 aaKnown RBP12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 COPS3Q9UNS2 423 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 GPR45Q9Y5Y3 372 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 EFSO43281 561 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 NSA2O95478 260 aaKnown RBP12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TPOP07202 933 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 DPP4P27487 766 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 RPS27AP62979 156 aaKnown RBP12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 UBA52P62987 128 aaKnown RBP12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 RTL10Q7L3V2 364 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 DRGXA6NNA5 263 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 IGFBP1P08833 259 aaPredicted RBP12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 RPA2P15927 270 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 YPEL5P62699 121 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 FAM174AQ8TBP5 190 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ALG12Q9BV10 488 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 CLMPQ9H6B4 373 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 GORASP2Q9H8Y8 452 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 SSTR2P30874 369 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 DNAJC5GQ8N7S2 189 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TFAP2CQ92754 450 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TMIGD2Q96BF3 282 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 B3GAT1Q9P2W7 334 aa12.12□□□□□ -0.47
SH3PXD2A-203ENST00000369774 OR6C65A6NJZ3 312 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 GNB1P62873 340 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 GAREM1Q9H706 876 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 OR10J4P0C629 311 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TBC1D28Q2M2D7 210 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ZNF836Q6ZNA1 936 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 NANPQ8TBE9 248 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 RTP4Q96DX8 246 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ANKRD60Q9BZ19 345 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 OR1D5P58170 312 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 LRFN5Q96NI6 719 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 RCE1Q9Y256 329 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 OR8U8P0C7N1 319 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TANGO2Q6ICL3 276 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 GAB3Q8WWW8 586 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ELF4Q99607 663 aaPredicted RBP12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TRBV4-1A0A0J9YWV2 114 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 YIF1BQ5BJH7 314 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 B3GLCTQ6Y288 498 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 INTS12Q96CB8 462 aaKnown RBP12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 POM121CA8CG34 1229 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 LINC00346Q8IVM7 164 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 OR56B1Q8NGI3 324 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 SHARPINQ9H0F6 387 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 LAMA4Q16363 1823 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 COL2A1P02458 1487 aaPredicted RBP12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ACOD1A6NK06 481 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 FADS1O60427 444 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 CRYZL1O95825 349 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 APC2O95996 2303 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 HOXD9P28356 352 aaPredicted RBP12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 GPR19Q15760 415 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TMEM64Q6YI46 380 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 B3GNT8Q7Z7M8 397 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 PMP2P02689 132 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 HLA-DOBP13765 273 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 SLC6A18Q96N87 628 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TMEM82A0PJX8 343 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 AADACP22760 399 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 TGM4P49221 684 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ADGRG5Q8IZF4 528 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ZFPM2Q8WW38 1151 aa12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 CNOT2Q9NZN8 540 aaKnown RBP12.11□□□□□ -0.47
SH3PXD2A-203ENST00000369774 FBXO27Q8NI29 283 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 CPNE4Q96A23 557 aaPredicted RBP12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 KCND3Q9UK17 655 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 AGAP14A8MT82 685 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 MAGEB1P43366 347 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 AGFG1P52594 562 aaKnown RBP12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 SLC5A12Q1EHB4 618 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 HACD4Q5VWC8 232 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 IDO2Q6ZQW0 420 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 SMIM14Q96QK8 99 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 MRPS28Q9Y2Q9 187 aaKnown RBP12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 ARPC4-TTLL3A0A0A6YYG9 625 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 A0A0B4J2A0 478 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 OR5H15A6NDH6 313 aa12.1□□□□□ -0.47
SH3PXD2A-203ENST00000369774 OR5H14A6NHG9 310 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms