RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CCDC58Q4VC31 144 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 C4orf46Q504U0 113 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SOWAHCQ53LP3 525 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 YIF1BQ5BJH7 314 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 COL13A1Q5TAT6 717 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 HEPHL1Q6MZM0 1159 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 GDPD3Q7L5L3 318 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 PRSS41Q7RTY9 318 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 OR1N1Q8NGS0 311 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 RAB40AQ8WXH6 277 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 HOXB13Q92826 284 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SPTSSAQ969W0 71 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 VWCEQ96DN2 955 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 TM4SF19Q96DZ7 209 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM41AQ96HV5 264 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM43Q9BTV4 400 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 DUSP15Q9H1R2 295 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 PPIL3Q9H2H8 161 aaKnown RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM185BQ9H7F4 350 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 MCCC2Q9HCC0 563 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CES1P1Q9UKY3 287 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 AK6Q9Y3D8 172 aaKnown RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CABIN1Q9Y6J0 2220 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 URB1O60287 2271 aaKnown RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 DOCK6Q96HP0 2047 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 A0A087WUJ7 227 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 IQCMA0A1B0GVH7 501 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM72A0PK05 275 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 H3BSH0 61 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CYR61O00622 381 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 EPHA8P29322 1005 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 MVDP53602 400 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CDC20Q12834 499 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF141Q15928 474 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CLPPQ16740 277 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 VASNQ6EMK4 673 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 KIRREL2Q6UWL6 708 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 H1FNTQ75WM6 255 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 UBQLNLQ8IYU4 475 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 FAM109AQ8N4B1 249 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CLEC1AQ8NC01 280 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 GALNT6Q8NCL4 622 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 OR1J4Q8NGS1 313 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 MAFAQ8NHW3 353 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 FAM46BQ96A09 425 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 Q96M85 177 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 NRTNQ99748 197 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 WDR77Q9BQA1 342 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 GINS4Q9BRT9 223 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 RHNO1Q9BSD3 238 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CACNG6Q9BXT2 260 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 GON7Q9BXV9 100 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 WWTR1Q9GZV5 400 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 NIPAL2Q9H841 368 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 ELOVL3Q9HB03 270 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 NRIP3Q9NQ35 241 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CHRNA9Q9UGM1 479 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 EXO1Q9UQ84 846 aaKnown RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 HSPB2A8KAH6 182 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 FAM25EA8MYX2 175 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 IMPA2O14732 288 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 ICOSLGO75144 302 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 IL9P15248 144 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 NAGAP17050 411 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 EVI2BP34910 448 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 RPL27P61353 136 aaKnown RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 PUDPQ08623 228 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 MRPL49Q13405 166 aaKnown RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 IL10RAQ13651 578 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 IL11RAQ14626 422 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 HSPB2Q16082 182 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 COL28A1Q2UY09 1125 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 Q499Y3 187 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 WDR74Q6RFH5 385 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 B3GLCTQ6Y288 498 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 WDR88Q6ZMY6 472 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC16A12Q6ZSM3 486 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF584Q8IVC4 421 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 FTMTQ8N4E7 242 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 UCN3Q969E3 161 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC25A46Q96AG3 418 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CCDC74BQ96LY2 380 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 OPALINQ96PE5 141 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 ARHGAP9Q9BRR9 750 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 ZPBPQ9BS86 351 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SYT4Q9H2B2 425 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 RNF167Q9H6Y7 350 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 BEX1Q9HBH7 125 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC7A11Q9UPY5 501 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 RPH3AQ9Y2J0 694 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 GPR55Q9Y2T6 319 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SPAG17Q6Q759 2223 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 H3BUI4 141 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF593O00488 134 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PRICKLE3O43900 615 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 HPGDSO60760 199 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ALX3O95076 343 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CBX7O95931 251 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 H2AFB2P0C5Z0 115 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 OR8G3PP0DMU2 310 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms