RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 H2AFY2Q9P0M6 372 aaPredicted RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 GRHPRQ9UBQ7 328 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 ZNF346Q9UL40 294 aaKnown RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 A0A1W2PNV4 684 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 M0R3G1 203 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 AKR7A3O95154 331 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 ACVR2AP27037 513 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 RFC3P40938 356 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 DIO1P49895 249 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 GFRA1P56159 465 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 OR2B6P58173 313 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 KRR1Q13601 381 aaKnown RBP21.44■■□□□ 1.02
SNX3-203ENST00000368979 IRF3Q14653 427 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 NEDD8Q15843 81 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 MESTQ5EB52 335 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 CCDC81Q6ZN84 652 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 MEPCEQ7L2J0 689 aaKnown RBP21.44■■□□□ 1.02
SNX3-203ENST00000368979 TMEM251Q8N6I4 163 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 OTULINQ96BN8 352 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 LGALS12Q96DT0 336 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 RNFT2Q96EX2 444 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 KLHL15Q96M94 604 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 SFXN2Q96NB2 322 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 NMNAT3Q96T66 252 aa21.44■■□□□ 1.02
SNX3-203ENST00000368979 GJE1A6NN92 205 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 FADS2O95864 444 aaKnown RBP21.43■■□□□ 1.02
SNX3-203ENST00000368979 EIF2S3P41091 472 aaKnown RBP21.43■■□□□ 1.02
SNX3-203ENST00000368979 MAP2K4P45985 399 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 P2RY4P51582 365 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 PLGLB1Q02325 96 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 RAB40BQ12829 278 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 ZPLD1Q8TCW7 415 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 FAR1Q8WVX9 515 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 KISS1RQ969F8 398 aaPredicted RBP21.43■■□□□ 1.02
SNX3-203ENST00000368979 CDCA4Q9BXL8 241 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 NMNAT2Q9BZQ4 307 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 TXNIPQ9H3M7 391 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 ACOT13Q9NPJ3 140 aa21.43■■□□□ 1.02
SNX3-203ENST00000368979 IRGMA1A4Y4 181 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 CCDC182A6NF36 153 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 SULT2B1O00204 365 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 PLGP00747 810 aaPredicted RBP21.42■■□□□ 1.02
SNX3-203ENST00000368979 CDKN2AP42771 156 aaKnown RBP21.42■■□□□ 1.02
SNX3-203ENST00000368979 MAGEA5P43359 124 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 RPL27P61353 136 aaKnown RBP21.42■■□□□ 1.02
SNX3-203ENST00000368979 SLC35A1P78382 337 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 TMED1Q13445 227 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 TBCEQ15813 527 aaPredicted RBP21.42■■□□□ 1.02
SNX3-203ENST00000368979 ACKR1Q16570 336 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 KLHL22Q53GT1 634 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 JAZF1Q86VZ6 243 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 TMEM99Q8N816 258 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 OR52I1Q8NGK6 324 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 ZNF519Q8TB69 540 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 SMPDL3BQ92485 455 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 MUL1Q969V5 352 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 TMIGD2Q96BF3 282 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 TMEM80Q96HE8 168 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 CCDC86Q9H6F5 360 aaKnown RBP21.42■■□□□ 1.02
SNX3-203ENST00000368979 FGF20Q9NP95 211 aaPredicted RBP21.42■■□□□ 1.02
SNX3-203ENST00000368979 QPCTLQ9NXS2 382 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 WARS2Q9UGM6 360 aaKnown RBP21.42■■□□□ 1.02
SNX3-203ENST00000368979 COMMD3-BMI1R4GMX3 469 aa21.42■■□□□ 1.02
SNX3-203ENST00000368979 A0A0J9YW62 118 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 OR6C68A6NDL8 312 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 NPIPB13A6NJU9 1138 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 SLC22A31A6NKX4 558 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 FAM166BA8MTA8 275 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 NPIPB4C9JG80 1138 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 LINC01387J3KSC0 135 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 CLUP10909 449 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 ARMC4Q5T2S8 1044 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 GTF2IRD2BQ6EKJ0 949 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 LEG1Q6P5S2 330 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.41■■□□□ 1.02
SNX3-203ENST00000368979 GTF2IRD2Q86UP8 949 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 GGNQ86UU5 652 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 KDM8Q8N371 416 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 ARIH2OSQ8N7S6 290 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 B3GAT1Q9P2W7 334 aa21.41■■□□□ 1.02
SNX3-203ENST00000368979 DIMT1Q9UNQ2 313 aaKnown RBP21.41■■□□□ 1.02
SNX3-203ENST00000368979 A0A1W2PRG6 482 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 SERPINI2O75830 405 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 CELA3AP09093 270 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 HLA-DOBP13765 273 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 KLHL12Q53G59 568 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 RNLSQ5VYX0 342 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 PAQR6Q6TCH4 344 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 B3GNT6Q6ZMB0 384 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 PXKQ7Z7A4 578 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 OR9Q1Q8NGQ5 310 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 C9orf43Q8TAL5 461 aaPredicted RBP21.4■■□□□ 1.02
SNX3-203ENST00000368979 TUBA1CQ9BQE3 449 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 MFRPQ9BY79 579 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 OR51V1Q9H2C8 321 aa21.4■■□□□ 1.02
SNX3-203ENST00000368979 EXOGQ9Y2C4 368 aaKnown RBP21.4■■□□□ 1.02
SNX3-203ENST00000368979 AQP7P3A6NL99 342 aa21.39■■□□□ 1.02
SNX3-203ENST00000368979 ZNF814B7Z6K7 855 aa21.39■■□□□ 1.02
SNX3-203ENST00000368979 RAB36O95755 333 aa21.39■■□□□ 1.02
SNX3-203ENST00000368979 SLC25A1P53007 311 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms