RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 C20orf141Q9NUB4 165 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 NTMQ9P121 344 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 ING4Q9UNL4 249 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 KCNMB2Q9Y691 235 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 A0A1W2PPL8 197 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 OIP5O43482 229 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 NKX2-2O95096 273 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 CLPSP04118 112 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 HEXBP07686 556 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 SAGP10523 405 aaPredicted RBP9.73□□□□□ -0.85
TPM3-212ENST00000368533 HPGDP15428 266 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 BMP7P18075 431 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 POU3F2P20265 443 aaPredicted RBP9.73□□□□□ -0.85
TPM3-212ENST00000368533 OMPP47874 163 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 RAB14P61106 215 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 EEF1A1P68104 462 aaKnown RBP9.73□□□□□ -0.85
TPM3-212ENST00000368533 PGGHGQ32M88 737 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 RNASE12Q5GAN4 147 aaKnown RBP9.73□□□□□ -0.85
TPM3-212ENST00000368533 OR52L1Q8NGH7 329 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 NAT6Q93015 286 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 ZNF416Q9BWM5 594 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 CLEC4MQ9H2X3 399 aaPredicted RBP9.73□□□□□ -0.85
TPM3-212ENST00000368533 FBXO4Q9UKT5 387 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 TRAV20A0A0B4J274 112 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 TMEM129A0AVI4 362 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 SYT5O00445 386 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 CDC42EP2O14613 210 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 ORC5O43913 435 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 LDOC1O95751 146 aaPredicted RBP9.72□□□□□ -0.85
TPM3-212ENST00000368533 HLA-DPB1P04440 258 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 TPOP07202 933 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 MRPL3P09001 348 aaKnown RBP9.72□□□□□ -0.85
TPM3-212ENST00000368533 NID1P14543 1247 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 GABRA5P31644 462 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 STAT5AP42229 794 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 ZNF136P52737 540 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 SLC37A1P57057 533 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 TPBGQ13641 420 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 OR1Q1Q15612 314 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 IDNKQ5T6J7 187 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 CBLN3Q6UW01 205 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 APOOLQ6UXV4 268 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 CXXC5Q7LFL8 322 aaKnown RBP9.72□□□□□ -0.85
TPM3-212ENST00000368533 C9orf40Q8IXQ3 194 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 PHOSPHO1Q8TCT1 267 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 TTTY10Q9BZA0 68 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 HDHD2Q9H0R4 259 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 RANBP3Q9H6Z4 567 aaPredicted RBP9.72□□□□□ -0.85
TPM3-212ENST00000368533 UBQLN2Q9UHD9 624 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 SPATA2Q9UM82 520 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 SLC22A23A1A5C7 686 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 ZNF254O75437 659 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 PAHP00439 452 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 CELA2AP08217 269 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 PRKAR1AP10644 381 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 NOS3P29474 1203 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 CLDN20P56880 219 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 RPS18P62269 152 aaKnown RBP9.72□□□□□ -0.85
TPM3-212ENST00000368533 ACY1Q03154 408 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 CD226Q15762 336 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 QSOX2Q6ZRP7 698 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 ADGRG3Q86Y34 549 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 OR51A7Q8NH64 312 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 MR1Q95460 341 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 SORCS2Q96PQ0 1159 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 ARHGDIGQ99819 225 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 ARHGAP9Q9BRR9 750 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 IFT27Q9BW83 186 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 ULBP3Q9BZM4 244 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 FGF20Q9NP95 211 aaPredicted RBP9.72□□□□□ -0.85
TPM3-212ENST00000368533 HINT3Q9NQE9 182 aaKnown RBP9.72□□□□□ -0.85
TPM3-212ENST00000368533 KLHL1Q9NR64 748 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 SDHAF2Q9NX18 166 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 CEP250Q9BV73 2442 aa9.72□□□□□ -0.85
TPM3-212ENST00000368533 CDHR4A6H8M9 788 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 GABRPO00591 440 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 SURF4O15260 269 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 LANCL1O43813 399 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 WISP1O95388 367 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 DDAH2O95865 285 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 DBIP07108 87 aaKnown RBP9.71□□□□□ -0.85
TPM3-212ENST00000368533 PRKAR1BP31321 381 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 ARL9Q6T311 187 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 RANBP3LQ86VV4 465 aaPredicted RBP9.71□□□□□ -0.85
TPM3-212ENST00000368533 LRRC17Q8N6Y2 441 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 ZNF524Q96C55 264 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 UBQLN3Q9H347 655 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 ISG20L2Q9H9L3 353 aaKnown RBP9.71□□□□□ -0.85
TPM3-212ENST00000368533 KRCC1Q9NPI7 259 aaPredicted RBP9.71□□□□□ -0.85
TPM3-212ENST00000368533 PCDHB16Q9NRJ7 776 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 CLEC4AQ9UMR7 237 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 GVINP1Q7Z2Y8 2422 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 DAPL1A0PJW8 107 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 ZNF354AO60765 605 aaPredicted RBP9.71□□□□□ -0.85
TPM3-212ENST00000368533 PTP4A3O75365 173 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 NUDT14O95848 222 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 CSTAP01040 98 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 HMGN1P05114 100 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 FAM157BP0CG42 384 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 FPR3P25089 353 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms