RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 EME1Q96AY2 570 aa11.28□□□□□ -0.6
EFNA1-201ENST00000368406 INTS12Q96CB8 462 aaKnown RBP11.28□□□□□ -0.6
EFNA1-201ENST00000368406 FEVQ99581 238 aa11.28□□□□□ -0.6
EFNA1-201ENST00000368406 CIB1Q99828 191 aa11.28□□□□□ -0.6
EFNA1-201ENST00000368406 TACO1Q9BSH4 297 aaKnown RBP11.28□□□□□ -0.6
EFNA1-201ENST00000368406 RNF6Q9Y252 685 aa11.28□□□□□ -0.6
EFNA1-201ENST00000368406 A0A0G2JNJ9 132 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 A0A1W2PRG6 482 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 MBD3L4A6NDZ8 208 aaPredicted RBP11.27□□□□□ -0.6
EFNA1-201ENST00000368406 MBD3L3A6NE82 208 aaPredicted RBP11.27□□□□□ -0.6
EFNA1-201ENST00000368406 MBD3L5A6NJ08 208 aaPredicted RBP11.27□□□□□ -0.6
EFNA1-201ENST00000368406 HSPB2A8KAH6 182 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 ZNF814B7Z6K7 855 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 MCIDASD6RGH6 385 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 PLPP3O14495 311 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 CDC42EP2O14613 210 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 TOXO94900 526 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 ADAP00813 363 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 GASTP01350 101 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 ANXA8P13928 327 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 AQP2P41181 271 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 RPL18Q07020 188 aaKnown RBP11.27□□□□□ -0.6
EFNA1-201ENST00000368406 TSPAN31Q12999 210 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 TRIP10Q15642 601 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 HSPB2Q16082 182 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 ANKDD1AQ495B1 522 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 ZBED5Q49AG3 693 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 ALG10Q5BKT4 473 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 C1orf94Q6P1W5 598 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 ZER1Q7Z7L7 766 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 KDM8Q8N371 416 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 OR9K2Q8NGE7 335 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 MBD3L2Q8NHZ7 208 aaPredicted RBP11.27□□□□□ -0.6
EFNA1-201ENST00000368406 GMPPAQ96IJ6 420 aaPredicted RBP11.27□□□□□ -0.6
EFNA1-201ENST00000368406 ZFP3Q96NJ6 502 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 C9orf16Q9BUW7 83 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 UCK2Q9BZX2 261 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 RNF122Q9H9V4 155 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 INIPQ9NRY2 104 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 GLRX2Q9NS18 164 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 KRT84Q9NSB2 600 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 TBC1D23Q9NUY8 699 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 Q9UFV3 132 aa11.27□□□□□ -0.6
EFNA1-201ENST00000368406 MAGED1Q9Y5V3 778 aaPredicted RBP11.27□□□□□ -0.6
EFNA1-201ENST00000368406 CACNA1CQ13936 2221 aa11.27□□□□□ -0.61
EFNA1-201ENST00000368406 A0A1W2PNV4 684 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 H3BN98 237 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 GPR171O14626 319 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 AKAP8O43823 692 aaKnown RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 RAMP1O60894 148 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 NDUFB2O95178 105 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 RCBTB2O95199 551 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 SOX14O95416 240 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 F13BP05160 661 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 GSSP48637 474 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 PRPS1P60891 318 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 H3F3AP84243 136 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 TOP3AQ13472 1001 aaPredicted RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 CDSNQ15517 529 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 SMARCD3Q6STE5 483 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 CASP12Q6UXS9 341 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 IGFN1Q86VF2 1251 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 CCDC71Q8IV32 467 aaPredicted RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 ANKK1Q8NFD2 765 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 MOSPD2Q8NHP6 518 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 TEX47Q8TBZ9 253 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 LIPHQ8WWY8 451 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 DNAJC9Q8WXX5 260 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 ZNF775Q96BV0 537 aaPredicted RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 OXGR1Q96P68 337 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 TNFRSF13CQ96RJ3 184 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 PSD2Q9BQI7 771 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 SF3B5Q9BWJ5 86 aaKnown RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 DGCR6LQ9BY27 220 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 C12orf49Q9H741 205 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 PAPOLBQ9NRJ5 636 aaKnown RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 ZNF629Q9UEG4 869 aaPredicted RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 NOSIPQ9Y314 301 aaKnown RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 NOX1Q9Y5S8 564 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 CELSR2Q9HCU4 2923 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 PDLIM1O00151 329 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 SS18L1O75177 396 aaPredicted RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 SMNDC1O75940 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 YES1P07947 543 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 IGFBP5P24593 272 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 POU1F1P28069 291 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 AGTR1P30556 359 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 SLC6A6P31641 620 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 UQCRC1P31930 480 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 DAP3P51398 398 aaKnown RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 RPS4XP62701 263 aaKnown RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 ZNF770Q6IQ21 691 aaPredicted RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 RPL13AP3Q6NVV1 102 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 GALNT5Q7Z7M9 940 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 TUSC5Q8IXB3 177 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 GPA33Q99795 319 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 NIPSNAP1Q9BPW8 284 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 RBM4BQ9BQ04 359 aaKnown RBP11.26□□□□□ -0.61
EFNA1-201ENST00000368406 IFT27Q9BW83 186 aa11.26□□□□□ -0.61
EFNA1-201ENST00000368406 RBM4Q9BWF3 364 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms