RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SEMA4CQ9C0C4 833 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 FAM86C1Q9NVL1 165 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 PAIP2BQ9ULR5 123 aaKnown RBP12.74□□□□□ -0.37
USF1-202ENST00000368020 TMEM14AQ9Y6G1 99 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 GVINP1Q7Z2Y8 2422 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 FAM25AB3EWG3 89 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 FAM25CB3EWG5 89 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 FAM25GB3EWG6 89 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 E9PI62 339 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 OIP5O43482 229 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 NUDT14O95848 222 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 ONECUT2O95948 504 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 PRKAR1AP10644 381 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 SPNP16150 400 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 RAB3BP20337 219 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 MST1P26927 711 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 EVI2BP34910 448 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 INPP1P49441 399 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 SUMO3P55854 103 aaPredicted RBP12.74□□□□□ -0.37
USF1-202ENST00000368020 CAV3P56539 151 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 E2F1Q01094 437 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 C1orf189Q5VU69 101 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 BAIAP2L2Q6UXY1 529 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 GRINAQ7Z429 371 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 OR6S1Q8NH40 331 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 NUBPLQ8TB37 319 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 METTL21AQ8WXB1 218 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 THRSPQ92748 146 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 RASD2Q96D21 266 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 ZC3HAV1LQ96H79 300 aaKnown RBP12.74□□□□□ -0.37
USF1-202ENST00000368020 CYSLTR2Q9NS75 346 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 ABRACLQ9P1F3 81 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 GNG8Q9UK08 70 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 RARRES3Q9UL19 164 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 PPIEQ9UNP9 301 aaKnown RBP12.74□□□□□ -0.37
USF1-202ENST00000368020 EXPH5Q8NEV8 1989 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 TRBV2A0A0J9YWF9 115 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 SHISA3A0PJX4 238 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 LRRN3E7EW58 273 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 CPNE3O75131 537 aaKnown RBP12.73□□□□□ -0.37
USF1-202ENST00000368020 CD59P13987 128 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 NAGAP17050 411 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 EDNRAP25101 427 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 NAA10P41227 235 aaPredicted RBP12.73□□□□□ -0.37
USF1-202ENST00000368020 TPTEP56180 551 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 RPL18Q07020 188 aaKnown RBP12.73□□□□□ -0.37
USF1-202ENST00000368020 TP53I3Q53FA7 332 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 YIF1BQ5BJH7 314 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 FAM69AQ5T7M9 428 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 GUSBP11Q6P575 273 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 SSX6Q7RTT6 188 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 OVCH1Q7RTY7 1134 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 UBQLNLQ8IYU4 475 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 PRR22Q8IZ63 422 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 SCAIQ8N9R8 606 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 OR8K3Q8NH51 312 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 ENKURQ8TC29 256 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 STT3BQ8TCJ2 826 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 RPS4Y2Q8TD47 263 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 STK35Q8TDR2 534 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 Q96M85 177 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 CMTM3Q96MX0 182 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 MOGAT1Q96PD6 335 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 MRI1Q9BV20 369 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 LRRN3Q9H3W5 708 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 RPRD1BQ9NQG5 326 aaKnown RBP12.73□□□□□ -0.37
USF1-202ENST00000368020 CTSFQ9UBX1 484 aa12.73□□□□□ -0.37
USF1-202ENST00000368020 ZNF292O60281 2723 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 SMIM30A4D0T7 59 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 CPED1A4D0V7 1026 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 NOTOA8MTQ0 251 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 A8MVM7 634 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 XKRYO14609 159 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 PDCD5O14737 125 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 OR2T1O43869 369 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 FADS1O60427 444 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 NCR1O76036 304 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 LDOC1O95751 146 aaPredicted RBP12.72□□□□□ -0.37
USF1-202ENST00000368020 BGLAPP02818 100 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 GP1BAP07359 652 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 HEXBP07686 556 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 UCHL1P09936 223 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 NPR2P20594 1047 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 MAPK3P27361 379 aaPredicted RBP12.72□□□□□ -0.37
USF1-202ENST00000368020 SHC1P29353 583 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 ACVR1BP36896 505 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 CASP3P42574 277 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 RFX2P48378 723 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 TMED10P49755 219 aaKnown RBP12.72□□□□□ -0.37
USF1-202ENST00000368020 RNF4P78317 190 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 DCDP81605 110 aaKnown RBP12.72□□□□□ -0.37
USF1-202ENST00000368020 DAB2P98082 770 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 INSL4Q14641 139 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 MFSD13AQ14CX5 517 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 SGCBQ16585 318 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 NKAIN1Q4KMZ8 207 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 LINC01590Q5TEZ4 76 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 PRAMEF17Q5VTA0 474 aa12.72□□□□□ -0.37
USF1-202ENST00000368020 COX15Q7KZN9 410 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms