RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 POMZP3Q6PJE2 187 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 TMEM205Q6UW68 189 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 CCBE1Q6UXH8 406 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 RPTNQ6XPR3 784 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 ADGRG3Q86Y34 549 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 C1orf210Q8IVY1 113 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 PHYHIPQ92561 330 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 TTC9Q92623 222 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 RNF31Q96EP0 1072 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 SNX18Q96RF0 628 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 SOSTQ9BQB4 213 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 TTYH2Q9BSA4 534 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 CRB3Q9BUF7 120 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 TIGARQ9NQ88 270 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 TBC1D24Q9ULP9 559 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 COPS3Q9UNS2 423 aa16.59■□□□□ 0.25
PDLIM7-203ENST00000359895 CPAMD8Q8IZJ3 1885 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 TRAV1-2A0A0B4J238 106 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 BOLA2-SMG1P6H3BVE0 249 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 SEC14L5O43304 696 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 OR2T1O43869 369 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 HPGDSO60760 199 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 TRIM3O75382 744 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 ARL6IP5O75915 188 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 TACSTD2P09758 323 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 EDNRAP25101 427 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 AZGP1P25311 298 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 RIN1Q13671 783 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 BAK1Q16611 211 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 COL28A1Q2UY09 1125 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 MESTQ5EB52 335 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 C1orf140Q5VVS0 124 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 MAML2Q8IZL2 1156 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 HGDQ93099 445 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 SPSB2Q99619 263 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 WDR77Q9BQA1 342 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 PTDSS2Q9BVG9 487 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 INIPQ9NRY2 104 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 NXT1Q9UKK6 140 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 ZNF346Q9UL40 294 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 GRIP1Q9Y3R0 1128 aa16.58■□□□□ 0.24
PDLIM7-203ENST00000359895 TRBV2A0A0J9YWF9 115 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 DVL2O14641 736 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 ADAM10O14672 748 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 ZFAND5O76080 213 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 AHSA1O95433 338 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 SPNP16150 400 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 TMED10P49755 219 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 FOXL2P58012 376 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 ASAH1Q13510 395 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 IDNKQ5T6J7 187 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 MFRPQ9BY79 579 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 TTTY10Q9BZA0 68 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 WDR54Q9H977 334 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 OCIAD1Q9NX40 245 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 TAS2R5Q9NYW4 299 aa16.57■□□□□ 0.24
PDLIM7-203ENST00000359895 A0A1W2PQ09 198 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 A0A1W2PRG6 482 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 D6RAR5 112 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 AGRPO00253 132 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 MEN1O00255 615 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 XKRYO14609 159 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 SNPHO15079 494 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 DXOO77932 396 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 SYPP08247 313 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 CENPAP49450 140 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 DLX5P56178 289 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 FBXW4P57775 412 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 EEF1A1P5Q5VTE0 462 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 TRILQ7L0X0 811 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 FAM220AQ7Z4H9 259 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 NLGN4YQ8NFZ3 816 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 RPS4Y2Q8TD47 263 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 RNF138Q8WVD3 245 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 SLC25A36Q96CQ1 311 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 UBL7Q96S82 380 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 SRA1Q9HD15 236 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 APMAPQ9HDC9 416 aa16.56■□□□□ 0.24
PDLIM7-203ENST00000359895 C17orf51A8MQB3 221 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 NTN3O00634 580 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 PHYHO14832 338 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 OR6A2O95222 327 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 IGHMP01871 453 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 CSF3P09919 207 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 MSX1P28360 303 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 APOBEC1P41238 236 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 RPL27P61353 136 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 MFSD13AQ14CX5 517 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 ZNF684Q5T5D7 378 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 MRPL14Q6P1L8 145 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 SFXN4Q6P4A7 337 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 SLC23A3Q6PIS1 610 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 CDC20BQ86Y33 519 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 TIGD4Q8IY51 512 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 ZNF511Q8NB15 262 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 SLC22A8Q8TCC7 542 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 TXNDC15Q96J42 360 aa16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 ADAD1Q96M93 576 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 PPIL3Q9H2H8 161 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-203ENST00000359895 PPP1R3EQ9H7J1 279 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms