RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NPY4RP50391 375 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 SLC7A9P82251 487 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 ACTBL2Q562R1 376 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM182Q6ZP80 229 aaPredicted RBP14.89□□□□□ -0.03
COL18A1-203ENST00000359759 LRRTM3Q86VH5 581 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 FAM122AQ96E09 287 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 TCTN2Q96GX1 697 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 TNFRSF13CQ96RJ3 184 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 NIPSNAP3BQ9BS92 247 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 SHPRHQ149N8 1683 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 C7orf72A4D263 438 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF217O75362 1048 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 SLC43A1O75387 559 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 DEFA4P12838 97 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 CPMP14384 443 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 OPRD1P41143 372 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM176BQ3YBM2 270 aaPredicted RBP14.89□□□□□ -0.03
COL18A1-203ENST00000359759 MMP21Q8N119 569 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM104Q8NE00 496 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 ABHD4Q8TB40 342 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 TVP23CQ96ET8 276 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 CHST11Q9NPF2 352 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 MYH7BA7E2Y1 1941 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 PRAMEF4O60810 478 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 GSK3AP49840 483 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 PCBD1P61457 104 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 CDKN3Q16667 212 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF718Q3SXZ3 478 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF566Q969W8 418 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 GPR78Q96P69 363 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 UBL7Q96S82 380 aaPredicted RBP14.89□□□□□ -0.03
COL18A1-203ENST00000359759 CALHM2Q9HA72 323 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 PRSS38A1L453 326 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 CEBPBP17676 345 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 APEX1P27695 318 aaKnown RBP14.89□□□□□ -0.03
COL18A1-203ENST00000359759 DBX2Q6ZNG2 339 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 TMUB2Q71RG4 321 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 GAREM2Q75VX8 874 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 ANKRD26Q9UPS8 1709 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 PSMB3P49720 205 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 LTB4RQ15722 352 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 SLC35B4Q969S0 331 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CLCF1Q9UBD9 225 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM212A6NML5 194 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF891A8MT65 544 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-203ENST00000359759 AIFM1O95831 613 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 PSMB1P20618 241 aaKnown RBP14.88□□□□□ -0.03
COL18A1-203ENST00000359759 SLC5A2P31639 672 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 OR6V1Q8N148 313 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 UTP4Q969X6 686 aaKnown RBP14.88□□□□□ -0.03
COL18A1-203ENST00000359759 RAB39BQ96DA2 213 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 NMNAT3Q96T66 252 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 ALG12Q9BV10 488 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 C1orf198Q9H425 327 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 C8orf33Q9H7E9 229 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-203ENST00000359759 UBQLN4Q9NRR5 601 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF230Q9UIE0 474 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-203ENST00000359759 ALPLP05186 524 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CLEC2LP0C7M8 214 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CT45A6P0DMU7 189 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CT45A5P0DMU8 189 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CT45A7P0DMV0 189 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CT45A8P0DMV1 189 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CT45A9P0DMV2 189 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 FLI1Q01543 452 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CT45A2Q5DJT8 189 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CT45A1Q5HYN5 189 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 PGAP1Q75T13 922 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 S100A7AQ86SG5 101 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 GCNT2Q8N0V5 402 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 SCCPDHQ8NBX0 429 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CT45A3Q8NHU0 189 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 GAB3Q8WWW8 586 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 PIGTQ969N2 578 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 ZBED3Q96IU2 234 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-203ENST00000359759 VPS25Q9BRG1 176 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 NTMT1Q9BV86 223 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 SUSD2Q9UGT4 822 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 ARL2-SNX15V9GYD0 113 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 AQP9O43315 295 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 CYTIPO60759 359 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 TCRBP04435 133 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 ZDHHC11BP0C7U3 371 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 POLR2IP36954 125 aaKnown RBP14.88□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF92Q03936 586 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 PLPP7Q8NBV4 271 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 EFSO43281 561 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 NME2P1O60361 137 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 STEAP1BQ6NZ63 245 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 BPIFCQ8NFQ6 507 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 OR52I1Q8NGK6 324 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 FGGYQ96C11 551 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 PSD2Q9BQI7 771 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 EXOSC3Q9NQT5 275 aaKnown RBP14.88□□□□□ -0.03
COL18A1-203ENST00000359759 NPFFR2Q9Y5X5 522 aa14.88□□□□□ -0.03
COL18A1-203ENST00000359759 ADAM10O14672 748 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 HLA-HP01893 362 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 ELK1P19419 428 aa14.87□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF140P52738 457 aaPredicted RBP14.87□□□□□ -0.03
COL18A1-203ENST00000359759 CARD18P57730 90 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms