RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 VDAC3Q9Y277 283 aa12.18□□□□□ -0.46
CCDC197-201ENST00000359253 TRAPPC4Q9Y296 219 aa12.18□□□□□ -0.46
CCDC197-201ENST00000359253 LSM2Q9Y333 95 aaKnown RBP12.18□□□□□ -0.46
CCDC197-201ENST00000359253 A0A1W2PRG6 482 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 ZC3H12DA2A288 527 aaKnown RBP12.17□□□□□ -0.46
CCDC197-201ENST00000359253 A6NIZ1 184 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 GJE1A6NN92 205 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 ZNF891A8MT65 544 aaPredicted RBP12.17□□□□□ -0.46
CCDC197-201ENST00000359253 LINC01387J3KSC0 135 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 J3QRE1 110 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 M0R082 166 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 CCRL2O00421 344 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 PLPP3O14495 311 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 RENP00797 406 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 DPP4P27487 766 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 GRPRP30550 384 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 SRD5A2P31213 254 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 RGS6P49758 472 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 RAP1BP61224 184 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 RAP1AP62834 184 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 ERVK-25P63136 954 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 BDH1Q02338 343 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 ZNF239Q16600 458 aaKnown RBP12.17□□□□□ -0.46
CCDC197-201ENST00000359253 KLHL12Q53G59 568 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 PRAMEF20Q5VT98 475 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 KLHL36Q8N4N3 616 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 OR4K13Q8NH42 304 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 POC1BQ8TC44 478 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 OTULINQ96BN8 352 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 SLC25A36Q96CQ1 311 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 PIGQQ9BRB3 760 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 UTP23Q9BRU9 249 aaKnown RBP12.17□□□□□ -0.46
CCDC197-201ENST00000359253 TXNIPQ9H3M7 391 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 PROK2Q9HC23 129 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 SEC14L4Q9UDX3 406 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 CAB39Q9Y376 341 aaPredicted RBP12.17□□□□□ -0.46
CCDC197-201ENST00000359253 NOX1Q9Y5S8 564 aa12.17□□□□□ -0.46
CCDC197-201ENST00000359253 IGF2RP11717 2491 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 CCDC182A6NF36 153 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 LIPT2A6NK58 231 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 FAM183AA6NL82 134 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 C17orf51A8MQB3 221 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 XKRYO14609 159 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 RNF13O43567 381 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 GLCEO94923 617 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 SBK2P0C263 348 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 OR2T7P0C7T2 308 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 TFPIP10646 304 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 ITGA3P26006 1051 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 DIO1P49895 249 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 DAP3P51398 398 aaKnown RBP12.16□□□□□ -0.46
CCDC197-201ENST00000359253 RPL27P61353 136 aaKnown RBP12.16□□□□□ -0.46
CCDC197-201ENST00000359253 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
CCDC197-201ENST00000359253 HSF2Q03933 536 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 PUDPQ08623 228 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 GPR50Q13585 617 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 SLC6A19Q695T7 634 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 C19orf48Q6RUI8 117 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 HDDC2Q7Z4H3 204 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 PXKQ7Z7A4 578 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 BEST3Q8N1M1 668 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 SIRT6Q8N6T7 355 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 ARIH2OSQ8N7S6 290 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 BBS1Q8NFJ9 593 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 OR2T4Q8NH00 348 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 OR2T27Q8NH04 317 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 Q96M85 177 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 MNTQ99583 582 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 OR51V1Q9H2C8 321 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 PRORYQ9H606 182 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 CHST11Q9NPF2 352 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 KLHL1Q9NR64 748 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 ERVK13-1Q9NX77 482 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 IL17BQ9UHF5 180 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 DKKL1Q9UK85 242 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 FBXL2Q9UKC9 423 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 BOKQ9UMX3 212 aaPredicted RBP12.16□□□□□ -0.46
CCDC197-201ENST00000359253 ADAM18Q9Y3Q7 739 aa12.16□□□□□ -0.46
CCDC197-201ENST00000359253 MRPS18BQ9Y676 258 aaKnown RBP12.16□□□□□ -0.46
CCDC197-201ENST00000359253 ANKRD11Q6UB99 2663 aaPredicted RBP12.16□□□□□ -0.46
CCDC197-201ENST00000359253 TEX13CA0A0J9YWL9 993 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 LOC102725191A0A1B0GVB3 256 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 A0A1W2PNV4 684 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 B4DXG7 233 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 DNPH1O43598 174 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 AKAP8O43823 692 aaKnown RBP12.15□□□□□ -0.46
CCDC197-201ENST00000359253 LIMS3P0CW19 117 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 LIMS4P0CW20 117 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 PSMA1P25786 263 aaKnown RBP12.15□□□□□ -0.46
CCDC197-201ENST00000359253 TGFBR2P37173 567 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 LIPAP38571 399 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 ETV1P50549 477 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 TUBA1BP68363 451 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 SLC35A1P78382 337 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 OC90Q02509 493 aaPredicted RBP12.15□□□□□ -0.46
CCDC197-201ENST00000359253 LSAMPQ13449 338 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 KRR1Q13601 381 aaKnown RBP12.15□□□□□ -0.46
CCDC197-201ENST00000359253 GALEQ14376 348 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 CTF1Q16619 201 aa12.15□□□□□ -0.46
CCDC197-201ENST00000359253 C1QL3Q5VWW1 255 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms