RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 ASF1BQ9NVP2 202 aa13.18□□□□□ -0.3
APP-205ENST00000358918 NCDNQ9UBB6 729 aa13.18□□□□□ -0.3
APP-205ENST00000358918 GPN3Q9UHW5 284 aaPredicted RBP13.18□□□□□ -0.3
APP-205ENST00000358918 PCDHB10Q9UN67 800 aa13.18□□□□□ -0.3
APP-205ENST00000358918 ZNF281Q9Y2X9 895 aa13.18□□□□□ -0.3
APP-205ENST00000358918 C5orf42Q9H799 3197 aa13.18□□□□□ -0.3
APP-205ENST00000358918 LINC00587B1AMM8 73 aa13.17□□□□□ -0.3
APP-205ENST00000358918 ERI3O43414 337 aaKnown RBP13.17□□□□□ -0.3
APP-205ENST00000358918 OR2F2O95006 317 aa13.17□□□□□ -0.3
APP-205ENST00000358918 AGR2O95994 175 aa13.17□□□□□ -0.3
APP-205ENST00000358918 RPN2P04844 631 aa13.17□□□□□ -0.3
APP-205ENST00000358918 F3P13726 295 aa13.17□□□□□ -0.3
APP-205ENST00000358918 HIST1H1TP22492 207 aaPredicted RBP13.17□□□□□ -0.3
APP-205ENST00000358918 OR2F1Q13607 317 aa13.17□□□□□ -0.3
APP-205ENST00000358918 GLYATL2Q8WU03 294 aa13.17□□□□□ -0.3
APP-205ENST00000358918 CCDC107Q8WV48 283 aa13.17□□□□□ -0.3
APP-205ENST00000358918 ZNF75AQ96N20 296 aa13.17□□□□□ -0.3
APP-205ENST00000358918 TCF7L1Q9HCS4 588 aa13.17□□□□□ -0.3
APP-205ENST00000358918 PRDM9Q9NQV7 894 aa13.17□□□□□ -0.3
APP-205ENST00000358918 C14orf105Q9NVL8 296 aa13.17□□□□□ -0.3
APP-205ENST00000358918 GKN3PP0CG01 181 aa13.17□□□□□ -0.3
APP-205ENST00000358918 AKAIN1P0CW23 69 aa13.17□□□□□ -0.3
APP-205ENST00000358918 SPP1P10451 314 aa13.17□□□□□ -0.3
APP-205ENST00000358918 GTF2F2P13984 249 aa13.17□□□□□ -0.3
APP-205ENST00000358918 SLC6A6P31641 620 aa13.17□□□□□ -0.3
APP-205ENST00000358918 GPM6BQ13491 265 aa13.17□□□□□ -0.3
APP-205ENST00000358918 SNTB1Q13884 538 aaKnown RBP13.17□□□□□ -0.3
APP-205ENST00000358918 ZNF345Q14585 488 aa13.17□□□□□ -0.3
APP-205ENST00000358918 AMZ1Q400G9 498 aa13.17□□□□□ -0.3
APP-205ENST00000358918 PAN3Q58A45 887 aaKnown RBP13.17□□□□□ -0.3
APP-205ENST00000358918 AVPI1Q5T686 147 aa13.17□□□□□ -0.3
APP-205ENST00000358918 GLT8D1Q68CQ7 371 aa13.17□□□□□ -0.3
APP-205ENST00000358918 DND1Q8IYX4 353 aaKnown RBP13.17□□□□□ -0.3
APP-205ENST00000358918 ACOT4Q8N9L9 421 aa13.17□□□□□ -0.3
APP-205ENST00000358918 SLC16A11Q8NCK7 471 aa13.17□□□□□ -0.3
APP-205ENST00000358918 OR52E2Q8NGJ4 325 aa13.17□□□□□ -0.3
APP-205ENST00000358918 OR51S1Q8NGJ8 323 aa13.17□□□□□ -0.3
APP-205ENST00000358918 OR1S2Q8NGQ3 325 aa13.17□□□□□ -0.3
APP-205ENST00000358918 OR14A16Q8NHC5 309 aa13.17□□□□□ -0.3
APP-205ENST00000358918 THAP6Q8TBB0 222 aa13.17□□□□□ -0.3
APP-205ENST00000358918 MS4A4EQ96PG1 132 aa13.17□□□□□ -0.3
APP-205ENST00000358918 VRK1Q99986 396 aaPredicted RBP13.17□□□□□ -0.3
APP-205ENST00000358918 CMSS1Q9BQ75 279 aaKnown RBP13.17□□□□□ -0.3
APP-205ENST00000358918 PRSS16Q9NQE7 514 aa13.17□□□□□ -0.3
APP-205ENST00000358918 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.17□□□□□ -0.3
APP-205ENST00000358918 OR10H1Q9Y4A9 318 aa13.17□□□□□ -0.3
APP-205ENST00000358918 ZNF780BQ9Y6R6 833 aa13.17□□□□□ -0.3
APP-205ENST00000358918 OR6C68A6NDL8 312 aa13.16□□□□□ -0.3
APP-205ENST00000358918 FAM25EA8MYX2 175 aa13.16□□□□□ -0.3
APP-205ENST00000358918 LYPD3O95274 346 aa13.16□□□□□ -0.3
APP-205ENST00000358918 TMIGD3P0DMS9 266 aaPredicted RBP13.16□□□□□ -0.3
APP-205ENST00000358918 BDKRB2P30411 391 aa13.16□□□□□ -0.3
APP-205ENST00000358918 MAGEB1P43366 347 aa13.16□□□□□ -0.3
APP-205ENST00000358918 METAP1P53582 386 aa13.16□□□□□ -0.3
APP-205ENST00000358918 MFSD12Q6NUT3 480 aa13.16□□□□□ -0.3
APP-205ENST00000358918 SDR9C7Q8NEX9 313 aa13.16□□□□□ -0.3
APP-205ENST00000358918 OR51L1Q8NGJ5 315 aa13.16□□□□□ -0.3
APP-205ENST00000358918 OR5K2Q8NHB8 316 aa13.16□□□□□ -0.3
APP-205ENST00000358918 NXPE3Q969Y0 559 aa13.16□□□□□ -0.3
APP-205ENST00000358918 MACROD1Q9BQ69 325 aa13.16□□□□□ -0.3
APP-205ENST00000358918 ADAT1Q9BUB4 502 aaKnown RBP13.16□□□□□ -0.3
APP-205ENST00000358918 FAM117AQ9C073 453 aa13.16□□□□□ -0.3
APP-205ENST00000358918 WDR13Q9H1Z4 485 aa13.16□□□□□ -0.3
APP-205ENST00000358918 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
APP-205ENST00000358918 SYNPO2LQ9H987 977 aa13.16□□□□□ -0.3
APP-205ENST00000358918 MYEF2Q9P2K5 600 aaKnown RBP13.16□□□□□ -0.3
APP-205ENST00000358918 CES1P1Q9UKY3 287 aa13.16□□□□□ -0.3
APP-205ENST00000358918 ICAM5Q9UMF0 924 aa13.16□□□□□ -0.3
APP-205ENST00000358918 GPR34Q9UPC5 381 aa13.16□□□□□ -0.3
APP-205ENST00000358918 CENPVL1A0A0U1RR11 272 aa13.16□□□□□ -0.3
APP-205ENST00000358918 OTOL1A6NHN0 477 aaPredicted RBP13.16□□□□□ -0.3
APP-205ENST00000358918 XRCC3O43542 346 aa13.16□□□□□ -0.3
APP-205ENST00000358918 SLC25A12O75746 678 aa13.16□□□□□ -0.3
APP-205ENST00000358918 FABP1P07148 127 aa13.16□□□□□ -0.3
APP-205ENST00000358918 THBS1P07996 1170 aa13.16□□□□□ -0.3
APP-205ENST00000358918 LAMP2P13473 410 aa13.16□□□□□ -0.3
APP-205ENST00000358918 KCNJ3P48549 501 aa13.16□□□□□ -0.3
APP-205ENST00000358918 NR0B1P51843 470 aaKnown RBP13.16□□□□□ -0.3
APP-205ENST00000358918 ST8SIA6P61647 398 aa13.16□□□□□ -0.3
APP-205ENST00000358918 LTBQ06643 244 aa13.16□□□□□ -0.3
APP-205ENST00000358918 DUSP8Q13202 625 aa13.16□□□□□ -0.3
APP-205ENST00000358918 MRM1Q6IN84 353 aaKnown RBP13.16□□□□□ -0.3
APP-205ENST00000358918 NANPQ8TBE9 248 aa13.16□□□□□ -0.3
APP-205ENST00000358918 C2CD4CQ8TF44 421 aa13.16□□□□□ -0.3
APP-205ENST00000358918 NUS1Q96E22 293 aa13.16□□□□□ -0.3
APP-205ENST00000358918 CHST6Q9GZX3 395 aa13.16□□□□□ -0.3
APP-205ENST00000358918 POFUT1Q9H488 388 aa13.16□□□□□ -0.3
APP-205ENST00000358918 ZFP57Q9NU63 452 aa13.16□□□□□ -0.3
APP-205ENST00000358918 UPB1Q9UBR1 384 aa13.16□□□□□ -0.3
APP-205ENST00000358918 ZNF629Q9UEG4 869 aaPredicted RBP13.16□□□□□ -0.3
APP-205ENST00000358918 TNFSF18Q9UNG2 199 aa13.16□□□□□ -0.3
APP-205ENST00000358918 NOSIPQ9Y314 301 aaKnown RBP13.16□□□□□ -0.3
APP-205ENST00000358918 ZNF337Q9Y3M9 751 aa13.16□□□□□ -0.3
APP-205ENST00000358918 A0A1W2PPV9 198 aa13.15□□□□□ -0.3
APP-205ENST00000358918 PRRT4C9JH25 899 aa13.15□□□□□ -0.3
APP-205ENST00000358918 GNB5O14775 395 aa13.15□□□□□ -0.3
APP-205ENST00000358918 SGCEO43556 437 aa13.15□□□□□ -0.3
APP-205ENST00000358918 EIF3GO75821 320 aaKnown RBP eCLIP13.15□□□□□ -0.3
APP-205ENST00000358918 PMS2P2O95744 297 aa13.15□□□□□ -0.3
APP-205ENST00000358918 ADH1CP00326 375 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms