RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CSF1P09603 554 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 S100A11P31949 105 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 NANOS3P60323 173 aaKnown RBP16.18■□□□□ 0.18
RTN4-204ENST00000357732 ALKBH1Q13686 389 aaKnown RBP16.18■□□□□ 0.18
RTN4-204ENST00000357732 CBFBQ13951 182 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 MPPED2Q15777 294 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 HIST3H2AQ7L7L0 130 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 OVCH2Q7RTZ1 564 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 KANSL1Q7Z3B3 1105 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 SHISA5Q8N114 240 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 OR5AK2Q8NH90 309 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 SCARB1Q8WTV0 552 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 HIST1H2ACQ93077 130 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 RNF166Q96A37 237 aaPredicted RBP16.18■□□□□ 0.18
RTN4-204ENST00000357732 PNPLA2Q96AD5 504 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 ALG12Q9BV10 488 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 REG4Q9BYZ8 158 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 CHIAQ9BZP6 476 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 SFXN1Q9H9B4 322 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 SDHAF2Q9NX18 166 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 PCDHGA5Q9Y5G8 931 aa16.18■□□□□ 0.18
RTN4-204ENST00000357732 C2orf16Q68DN1 1984 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 TRBV23OR9-2A0A075B6M9 112 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 TBC1D3DA0A087WVF3 549 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 TBC1D3LB9A6J9 549 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 TNFRSF10CO14798 259 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 XRCC3O43542 346 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 RP2O75695 350 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 SCO1O75880 301 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 TBC1D3HP0C7X1 549 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 S1PR1P21453 382 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 ACTR1BP42025 376 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 TNFRSF4P43489 277 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 ACTR1AP61163 376 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 SEC61A1P61619 476 aaKnown RBP16.17■□□□□ 0.18
RTN4-204ENST00000357732 SSBP1Q04837 148 aaKnown RBP16.17■□□□□ 0.18
RTN4-204ENST00000357732 TBC1D3CQ6IPX1 549 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 GLB1L2Q8IW92 636 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 TBC1D3Q8IZP1 549 aaPredicted RBP16.17■□□□□ 0.18
RTN4-204ENST00000357732 ZNF417Q8TAU3 575 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 PHOSPHO2Q8TCD6 241 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 FAM3CQ92520 227 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 SMAD5Q99717 465 aaKnown RBP16.17■□□□□ 0.18
RTN4-204ENST00000357732 DPYSL5Q9BPU6 564 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 CA10Q9NS85 328 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 SCML1Q9UN30 329 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 PRELID1Q9Y255 219 aa16.17■□□□□ 0.18
RTN4-204ENST00000357732 BLACEA4D250 179 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 H7C417 338 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 RBBP9O75884 186 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 HOXD4P09016 255 aaPredicted RBP16.16■□□□□ 0.18
RTN4-204ENST00000357732 RGS7BPQ6MZT1 257 aaPredicted RBP16.16■□□□□ 0.18
RTN4-204ENST00000357732 ENPP7Q6UWV6 458 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 CHMP1BQ7LBR1 199 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 PRSS41Q7RTY9 318 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 YAF2Q8IY57 180 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 ZNF595Q8IYB9 648 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 ZNRF4Q8WWF5 429 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 ARSGQ96EG1 525 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 VSTM2LQ96N03 204 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 MTFP1Q9UDX5 166 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 NUP210LQ5VU65 1888 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 OR6C74A6NCV1 312 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 PPP3CBP16298 524 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 LRRTM1Q86UE6 522 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 JAZF1Q86VZ6 243 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 ZNF227Q86WZ6 799 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 SDR16C5Q8N3Y7 309 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 CSNK1A1LQ8N752 337 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 PIGKQ92643 395 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 Q9N2J8 555 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 MED11Q9P086 117 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 HIF3AQ9Y2N7 669 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 KCNMB2Q9Y691 235 aa16.16■□□□□ 0.18
RTN4-204ENST00000357732 SUSD5O60279 629 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 UPK3AO75631 287 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 IGKV1D-16P01601 117 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 DCTDP32321 178 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 GMFBP60983 142 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 EMC4Q5J8M3 183 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 SERPINA12Q8IW75 414 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 OR5T3Q8NGG3 340 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 GCDHQ92947 438 aaPredicted RBP16.15■□□□□ 0.18
RTN4-204ENST00000357732 KXD1Q9BQD3 176 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 OPN4Q9UHM6 478 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 PFDN2Q9UHV9 154 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 A0A0J9YY10 115 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 CDK2AP1O14519 115 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 ZNF254O75437 659 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 SERPINI2O75830 405 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 TXNDC12O95881 172 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 PNMTP11086 282 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 ANXA7P20073 488 aaKnown RBP16.15■□□□□ 0.18
RTN4-204ENST00000357732 NUP62P37198 522 aaPredicted RBP16.15■□□□□ 0.18
RTN4-204ENST00000357732 GRK6P43250 576 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 GPM6BQ13491 265 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 GPR18Q14330 331 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 LEG1Q6P5S2 330 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 SLC36A1Q7Z2H8 476 aa16.15■□□□□ 0.18
RTN4-204ENST00000357732 NUP54Q7Z3B4 507 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms