RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 C12orf45Q8N5I9 185 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 HHATLQ9HCP6 504 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 V9GY05 133 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 BCL9LQ86UU0 1499 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 SPINK4O60575 86 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 HRH2P25021 359 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 OPRM1P35372 400 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 PLXDC2Q6UX71 529 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CPXM2Q8N436 756 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 OR4N2Q8NGD1 307 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 OR13C5Q8NGS8 318 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CA5BP1Q8WTZ4 195 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 MS4A4EQ96PG1 132 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TMPRSS13Q9BYE2 586 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 ZBP1Q9H171 429 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 AGPAT4Q9NRZ5 378 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 LIPT1Q9Y234 373 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 BORCS7-ASMTA0A0B4J1R7 106 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 DNAJB13P59910 316 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 LTBQ06643 244 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 RABEPKQ7Z6M1 372 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 STEAP2Q8NFT2 490 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 OR6S1Q8NH40 331 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 NIPSNAP1Q9BPW8 284 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 KIR2DS5A0A0G2JLQ3 304 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 A0A0G2JNG1 304 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 ANKRD33BA6NCL7 494 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 KIR2DS3K7RE56 304 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 ADAM10O14672 748 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 SLC22A1O15245 554 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 RASAL1O95294 804 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 SNCAP37840 140 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 ADPRHP54922 357 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 HYAL1Q12794 435 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 KIR2DS5Q14953 304 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 ZBED5Q49AG3 693 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CCBE1Q6UXH8 406 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 GALNT16Q8N428 558 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 RSRP1Q9BUV0 290 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 NAA50Q9GZZ1 169 aaKnown RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 NDRG3Q9UGV2 375 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 MRPS2Q9Y399 296 aaKnown RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 XRCC3O43542 346 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 COX7A1P24310 79 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 MAGEB1P43366 347 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 PM20D1Q6GTS8 502 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 SPINK14Q6IE38 97 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 RBMS3Q6XE24 437 aaKnown RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 ANGPTL5Q86XS5 388 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TM4SF18Q96CE8 201 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 MALSU1Q96EH3 234 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 GLIPR2Q9H4G4 154 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 PATZ1Q9HBE1 687 aaKnown RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM9BQ9NQ34 198 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 LOXL2Q9Y4K0 774 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 IGHV3-43A0A0B4J1X8 118 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 DRGXA6NNA5 263 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 BCAS2O75934 225 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 OR2J2O76002 312 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CRYZL1O95825 349 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 IGHV3-43DP0DP04 118 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 IAPPP10997 89 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 GLRA1P23415 457 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 OR8G1Q15617 311 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM268Q5VZI3 342 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 BAIAP2L2Q6UXY1 529 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF783Q6ZMS7 281 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 SSX7Q7RTT5 188 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 OR5L1Q8NGL2 311 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 OR1J1Q8NGS3 322 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 GAB3Q8WWW8 586 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TEX37Q96LM6 180 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CTSFQ9UBX1 484 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 OSGIN1Q9UJX0 560 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 SCML1Q9UN30 329 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 COPS3Q9UNS2 423 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 STYXL1Q9Y6J8 313 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 URGCP-MRPS24S4R325 110 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 LYZL6O75951 148 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 FCER1GP30273 86 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CLDN15P56746 228 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 KIR2DS3Q14952 304 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 PRR27Q6MZM9 219 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 SLC15A4Q8N697 577 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TANKQ92844 425 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 SULT4A1Q9BR01 284 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 POMT1Q9Y6A1 747 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 EPOP01588 193 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 AOAHP28039 575 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 RPL26P61254 145 aaKnown RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TEKQ02763 1124 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 C17orf67Q0P5P2 114 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 HLA-BQ31612 363 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 PLEKHN1Q494U1 663 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 SEZ6L2Q6UXD5 910 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CMTM1Q8IZ96 169 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 PPP1R35Q8TAP8 253 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CHTF18Q8WVB6 975 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 MOAP1Q96BY2 351 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 GPR78Q96P69 363 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms