RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 SH3BGRL2Q9UJC5 107 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ADAMTS5Q9UNA0 930 aa6□□□□□ -1.45
UPF2-201ENST00000356352 MED16Q9Y2X0 877 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ZBTB32Q9Y2Y4 487 aaPredicted RBP6□□□□□ -1.45
UPF2-201ENST00000356352 USP3Q9Y6I4 520 aa6□□□□□ -1.45
UPF2-201ENST00000356352 TNFSF12-TNFSF13A0A0A6YY99 330 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ZNF705GA8MUZ8 300 aaPredicted RBP6□□□□□ -1.45
UPF2-201ENST00000356352 TNFSF12O43508 249 aa6□□□□□ -1.45
UPF2-201ENST00000356352 SULT1B1O43704 296 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ABHD16AO95870 558 aa6□□□□□ -1.45
UPF2-201ENST00000356352 GJA4P35212 333 aa6□□□□□ -1.45
UPF2-201ENST00000356352 NPBWR1P48145 328 aa6□□□□□ -1.45
UPF2-201ENST00000356352 VEGFBP49765 207 aa6□□□□□ -1.45
UPF2-201ENST00000356352 PPT1P50897 306 aa6□□□□□ -1.45
UPF2-201ENST00000356352 EMX1Q04741 257 aaPredicted RBP6□□□□□ -1.45
UPF2-201ENST00000356352 SLC9A3R2Q15599 337 aa6□□□□□ -1.45
UPF2-201ENST00000356352 Q6ZTK2 550 aa6□□□□□ -1.45
UPF2-201ENST00000356352 FCRLAQ7L513 359 aa6□□□□□ -1.45
UPF2-201ENST00000356352 CISD2Q8N5K1 135 aaKnown RBP6□□□□□ -1.45
UPF2-201ENST00000356352 TTC9BQ8N6N2 239 aa6□□□□□ -1.45
UPF2-201ENST00000356352 CLDN22Q8N7P3 220 aa6□□□□□ -1.45
UPF2-201ENST00000356352 OR13C2Q8NGS9 318 aa6□□□□□ -1.45
UPF2-201ENST00000356352 IP6K3Q96PC2 410 aa6□□□□□ -1.45
UPF2-201ENST00000356352 OR6C1Q96RD1 312 aa6□□□□□ -1.45
UPF2-201ENST00000356352 CPPED1Q9BRF8 314 aaPredicted RBP6□□□□□ -1.45
UPF2-201ENST00000356352 KATNB1Q9BVA0 655 aa6□□□□□ -1.45
UPF2-201ENST00000356352 RTL8AQ9BWD3 113 aa6□□□□□ -1.45
UPF2-201ENST00000356352 BARHL1Q9BZE3 327 aa6□□□□□ -1.45
UPF2-201ENST00000356352 RAB22AQ9UL26 194 aa6□□□□□ -1.45
UPF2-201ENST00000356352 RPH3ALQ9UNE2 315 aa6□□□□□ -1.45
UPF2-201ENST00000356352 RCE1Q9Y256 329 aa6□□□□□ -1.45
UPF2-201ENST00000356352 HS3ST2Q9Y278 367 aa6□□□□□ -1.45
UPF2-201ENST00000356352 SIT1Q9Y3P8 196 aa6□□□□□ -1.45
UPF2-201ENST00000356352 KRBA1A5PL33 1030 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 EIF4E2O60573 245 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 CLDN1O95832 211 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GSTP1P09211 210 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 CTXN2P0C2S0 81 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PTBP1P26599 531 aaKnown RBP eCLIP5.99□□□□□ -1.452e-9■■■■■ 35.2
UPF2-201ENST00000356352 MS4A2Q01362 244 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 TMEM52BQ4KMG9 183 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 BCL7AQ4VC05 210 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ZNF789Q5FWF6 425 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ADGRE4PQ86SQ3 457 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PARP16Q8N5Y8 322 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 STT3BQ8TCJ2 826 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ZNF845Q96IR2 970 aaPredicted RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 FIZ1Q96SL8 496 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ATOH8Q96SQ7 321 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ZPBPQ9BS86 351 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 HRH4Q9H3N8 390 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PATZ1Q9HBE1 687 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 TM7SF3Q9NS93 570 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 UBL3O95164 117 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SCG5P05408 212 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GYPBP06028 91 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 CNR1P21554 472 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 HOXD9P28356 352 aaPredicted RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 GABRB3P28472 473 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 HOXD11P31277 338 aaPredicted RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 RFX2P48378 723 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 KIAA1024LP59773 190 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GPLD1P80108 840 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SORDQ00796 357 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 ZNF91Q05481 1191 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 MLF2Q15773 248 aaPredicted RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 SYPL1Q16563 259 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 C2orf76Q3KRA6 126 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SHEQ5VZ18 495 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 KANSL1Q7Z3B3 1105 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 DPPA2Q7Z7J5 298 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 NAXDQ8IW45 347 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 STACQ99469 402 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 CACFD1Q9UGQ2 172 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 NDRG4Q9ULP0 352 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 DIMT1Q9UNQ2 313 aaKnown RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 NUP188Q5SRE5 1749 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 OR6C76A6NM76 312 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PRAMEF4O60810 478 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 DEFA4P12838 97 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 HTR1FP30939 366 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GIPRP48546 466 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 EPHA5P54756 1037 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 LCN6P62502 163 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GLYR1Q49A26 553 aaPredicted RBP5.99□□□□□ -1.45
UPF2-201ENST00000356352 MDGA2Q7Z553 956 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 TP53INP2Q8IXH6 220 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PIANPQ8IYJ0 282 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 SLC30A7Q8NEW0 376 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GJC3Q8NFK1 279 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 RNF141Q8WVD5 230 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 GTF2H4Q92759 462 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 NUDT22Q9BRQ3 303 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 TMEM43Q9BTV4 400 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 KIR3DX1Q9H7L2 352 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PLEKHF2Q9H8W4 249 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 AKAP12Q02952 1782 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 LOC100289279A0A1B0GTE1 492 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 A0A1W2PQ09 198 aa5.99□□□□□ -1.45
UPF2-201ENST00000356352 PRAMEF25A6NGN4 478 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms