RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 MST1LQ2TV78 715 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 IQCCQ4KMZ1 466 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 GCNT6Q5T4J0 391 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 FAM69AQ5T7M9 428 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 TUBA1AQ71U36 451 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 H1FNTQ75WM6 255 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-204ENST00000356316 MAVSQ7Z434 540 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 CCDC36Q8IYA8 594 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 FAM169BQ8N8A8 192 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 LSMEM1Q8N8F7 131 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 IL17RDQ8NFM7 739 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 NFKBIDQ8NI38 313 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 LRRC8CQ8TDW0 803 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 NANOS1Q8WY41 292 aaKnown RBP9.28□□□□□ -0.92
CAPN3-204ENST00000356316 TAAR8Q969N4 342 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 TLCD1Q96CP7 247 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 SPDL1Q96EA4 605 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 KTI12Q96EK9 354 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-204ENST00000356316 SLC47A1Q96FL8 570 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 ANKRD27Q96NW4 1050 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 EPYCQ99645 322 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 CRLF2Q9HC73 371 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 MYOZ1Q9NP98 299 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-204ENST00000356316 CCDC167Q9P0B6 97 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 CHST2Q9Y4C5 530 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 YLPM1P49750 1951 aaKnown RBP9.28□□□□□ -0.92
CAPN3-204ENST00000356316 ABCA1O95477 2261 aa9.28□□□□□ -0.92
CAPN3-204ENST00000356316 ALPK2Q86TB3 2170 aa9.27□□□□□ -0.92
CAPN3-204ENST00000356316 RTTNQ86VV8 2226 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 LOC102725191A0A1B0GVB3 256 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 ZNF726A6NNF4 738 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 RPL36A-HNRNPH2H7BZ11 118 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 M0R082 166 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 LMX1BO60663 402 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 PDE5AO76074 875 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 CECR9P0C854 216 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 CBR1P16152 277 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 NPR2P20594 1047 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 CBLP22681 906 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 GRPRP30550 384 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 NR4A2P43354 598 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 IDH3AP50213 366 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 FAM91A1Q658Y4 838 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 FAM166AQ6J272 317 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 C6orf89Q6UWU4 347 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 LINGO2Q7L985 606 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 LSRQ86X29 649 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-204ENST00000356316 SNX32Q86XE0 403 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 UEVLDQ8IX04 471 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 C10orf53Q8N6V4 93 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 ZNF417Q8TAU3 575 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 DYDC1Q8WWB3 177 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 C7orf26Q96N11 449 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 FOXN4Q96NZ1 517 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 ZNF587Q96SQ5 575 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-204ENST00000356316 CCDC28BQ9BUN5 200 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 PTDSS2Q9BVG9 487 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 ASPNQ9BXN1 380 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 GPR35Q9HC97 309 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 B3GAT2Q9NPZ5 323 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 TMEM160Q9NX00 188 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 CRNNQ9UBG3 495 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-204ENST00000356316 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-204ENST00000356316 KCNS2Q9ULS6 477 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 SPEF1Q9Y4P9 236 aa9.27□□□□□ -0.93
CAPN3-204ENST00000356316 CUBNO60494 3623 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 A0A096LNT2 108 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 LOC100289279A0A1B0GTE1 492 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 A0A1B0GWA3 101 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 M0R3G1 203 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 ZNF432O94892 652 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 OR6A2O95222 327 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 IGKV3-15P01624 115 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 APEHP13798 732 aaKnown RBP9.26□□□□□ -0.93
CAPN3-204ENST00000356316 HNF1AP20823 631 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 IDH3GP51553 393 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-204ENST00000356316 RGS8P57771 180 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-204ENST00000356316 NPRL3Q12980 569 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 PMS2P3Q13401 168 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 SCARB2Q14108 478 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 EFNB3Q15768 340 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 ADIPOQQ15848 244 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 CEACAM16Q2WEN9 425 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 AGKQ53H12 422 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 LRIF1Q5T3J3 769 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 RANBP3LQ86VV4 465 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-204ENST00000356316 ARMC8Q8IUR7 673 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 ANKS4BQ8N8V4 417 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 NUP37Q8NFH4 326 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 NEU4Q8WWR8 484 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-204ENST00000356316 SORCS2Q96PQ0 1159 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 PLK3Q9H4B4 646 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 RABEP2Q9H5N1 569 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 EVA1AQ9H8M9 152 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 SLC25A37Q9NYZ2 338 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 SLAMF8Q9P0V8 285 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 TESQ9UGI8 421 aaKnown RBP9.26□□□□□ -0.93
CAPN3-204ENST00000356316 USP22Q9UPT9 525 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 POFUT2Q9Y2G5 429 aa9.26□□□□□ -0.93
CAPN3-204ENST00000356316 CORINQ9Y5Q5 1042 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms