RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 A0A1W2PR64 198 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 A0A1W2PRV1 198 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 TUSC2O75896 110 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 KIAA1024LP59773 190 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 TMEM255BQ8WV15 326 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 PPA2Q9H2U2 334 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 GLTPQ9NZD2 209 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 C1orf196B1AJZ1 125 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 GABREP78334 506 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 ASB16Q96NS5 453 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 KIR3DX1Q9H7L2 352 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 A0A1W2PQ09 198 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 HSBP1L1C9JCN9 74 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF701M0R085 212 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-202ENST00000355480 TNFRSF10AO00220 468 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 ADPRHP54922 357 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 DLX5P56178 289 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 BEST4Q8NFU0 473 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 OR1E3Q8WZA6 343 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 ZC3HAV1LQ96H79 300 aaKnown RBP16.67■□□□□ 0.26
COL18A1-202ENST00000355480 P2RY10O00398 339 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 PRICKLE3O43900 615 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-202ENST00000355480 TNFSF8P32971 234 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 CCSMST1Q4G0I0 132 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 ACTBL2Q562R1 376 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 COX20Q5RI15 118 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 GOT1L1Q8NHS2 421 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-202ENST00000355480 SNRPBP14678 240 aaKnown RBP16.66■□□□□ 0.26
COL18A1-202ENST00000355480 PAQR8Q8TEZ7 354 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 SECTM1Q8WVN6 248 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 NEURL3Q96EH8 262 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 NRSN2Q9GZP1 204 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 A4GALTQ9NPC4 353 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 NKX6-3A6NJ46 265 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 TOR1AO14656 332 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 B3GALT4O96024 378 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 BLVRBP30043 206 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-202ENST00000355480 GABRA5P31644 462 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 DAPP51397 102 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 TAS2R30P59541 319 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 C6orf15Q6UXA7 325 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF687Q8N1G0 1237 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 SUMF2Q8NBJ7 301 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 HAS2Q92819 552 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 TMEM106AQ96A25 262 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 CCDC74AQ96AQ1 378 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 PHF7Q9BWX1 381 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-202ENST00000355480 GFOD1Q9NXC2 390 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 RPH3ALQ9UNE2 315 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 GMDSO60547 372 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 FZD7O75084 574 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 GSTP1P09211 210 aaKnown RBP16.66■□□□□ 0.26
COL18A1-202ENST00000355480 NFYAP23511 347 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-202ENST00000355480 SLC1A3P43003 542 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 EDDM3BP56851 147 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 PRICKLE2Q7Z3G6 844 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 LSMEM2Q8N112 164 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 OR6T1Q8NGN1 323 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 UBL7Q96S82 380 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-202ENST00000355480 FAM166BA8MTA8 275 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 ALPLP05186 524 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 NPPBP16860 134 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 CD1CP29017 333 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 LIM2P55344 173 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 FOXK2Q01167 660 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 DPY19L2P2Q6ZN68 376 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 NOXA1Q86UR1 476 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 FGF22Q9HCT0 170 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 MYO10Q9HD67 2058 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 LGALS4P56470 323 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 PFN3P60673 137 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 GHSRQ92847 366 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 LIN37Q96GY3 246 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-202ENST00000355480 WWTR1Q9GZV5 400 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 CD300AQ9UGN4 299 aa16.66■□□□□ 0.26
COL18A1-202ENST00000355480 A8MVM7 634 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 CRMP1Q14194 572 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF77Q15935 545 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 STEAP3Q658P3 488 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 MFSD12Q6NUT3 480 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 GDF7Q7Z4P5 450 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 KCNG3Q8TAE7 436 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 TMEM174Q8WUU8 243 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF582Q96NG8 517 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-202ENST00000355480 TSSK2Q96PF2 358 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 C20orf27Q9GZN8 174 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 TNFRSF10CO14798 259 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 HOXC11O43248 304 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-202ENST00000355480 RUNX2Q13950 521 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 SPRED3Q2MJR0 410 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 RETREG3Q86VR2 466 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 IFI44Q8TCB0 444 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 SAV1Q9H4B6 383 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-202ENST00000355480 NRIP3Q9NQ35 241 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 MSTNO14793 375 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 KCNK2O95069 426 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 EIF2DP41214 584 aaKnown RBP16.65■□□□□ 0.26
COL18A1-202ENST00000355480 RPS25P62851 125 aaKnown RBP16.65■□□□□ 0.26
COL18A1-202ENST00000355480 Q6ZSR9 355 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 IGLV3-10A0A075B6K4 115 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms