RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 FAM46BQ96A09 425 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 ZC3H10Q96K80 434 aaKnown RBP11.37□□□□□ -0.59
COLCA1-201ENST00000355430 PLA2G2FQ9BZM2 168 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 C20orf85Q9H1P6 137 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 PPA2Q9H2U2 334 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 HINT3Q9NQE9 182 aaKnown RBP11.37□□□□□ -0.59
COLCA1-201ENST00000355430 PRDM9Q9NQV7 894 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF337Q9Y3M9 751 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 MIA3Q5JRA6 1907 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 DCDC2BA2VCK2 349 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 GAPDHSO14556 408 aaPredicted RBP11.37□□□□□ -0.59
COLCA1-201ENST00000355430 GPR75O95800 540 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 LIPCP11150 499 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 PSMB1P20618 241 aaKnown RBP11.37□□□□□ -0.59
COLCA1-201ENST00000355430 IL32P24001 234 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 EPHA5P54756 1037 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 MFSD12Q6NUT3 480 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 PRR22Q8IZ63 422 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 GDF15Q99988 308 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 SLC52A3Q9NQ40 469 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF705EA8MWA4 302 aaPredicted RBP11.37□□□□□ -0.59
COLCA1-201ENST00000355430 CTSLP07711 333 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 OR8G3PP0DMU2 310 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 BTG1P62324 171 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 PPP2CBP62714 309 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 PPP2CAP67775 309 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 BTN1A1Q13410 526 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 SQSTM1Q13501 440 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 EEF1A1P5Q5VTE0 462 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 CFAP77Q6ZQR2 320 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 SLC35F3Q8IY50 421 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 FCRL1Q96LA6 429 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 MRI1Q9BV20 369 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 ASF1BQ9NVP2 202 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 COPS3Q9UNS2 423 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 A0A1W2PR48 441 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 HTR2AP28223 471 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 SFTPDP35247 375 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 EIF4EBP2Q13542 120 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 EIF2B1Q14232 305 aaKnown RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 MUCL1Q96DR8 90 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 MED30Q96HR3 178 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 OR5B2Q96R09 309 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 CHRDQ9H2X0 955 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 NOX4Q9NPH5 578 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 TRAPPC4Q9Y296 219 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 TRBV5-3A0A0A0MS03 114 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 POM121BA6NF01 834 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 ARGFXA6NJG6 315 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 LCMT2O60294 686 aaKnown RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 DPM1O60762 260 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 CD160O95971 181 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 EIF4EP06730 217 aaKnown RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 EVX1P49640 407 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 CLDN20P56880 219 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 GABREP78334 506 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 MELKQ14680 651 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 C12orf73Q69YU5 71 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 TECPR1Q7Z6L1 1165 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 KMT5CQ86Y97 462 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 GLB1L2Q8IW92 636 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 GOT1L1Q8NHS2 421 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 TAAR9Q96RI9 348 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 C19orf43Q9BQ61 176 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 DHCR7Q9UBM7 475 aaKnown RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 TRABD2BA6NFA1 517 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 SULT2B1O00204 365 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 WDPCPO95876 746 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 PDGFAP04085 211 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 GPR3P46089 330 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 DLX5P56178 289 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 IFITM3Q01628 133 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 TRIP6Q15654 476 aaKnown RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 PAPD4Q6PIY7 484 aaKnown RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 ATF6BQ99941 703 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 OR51B4Q9Y5P0 310 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 CXorf51AA0A1B0GTR3 108 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 HOXC8P31273 242 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 CRYBB2P43320 205 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 OR10A3P58181 314 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 SLC6A19Q695T7 634 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 KIAA0907Q7Z7F0 614 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 MS4A6EQ96DS6 147 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 NMNAT3Q96T66 252 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 PLA2G12AQ9BZM1 189 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 SLC25A19Q9HC21 320 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 MEPEQ9NQ76 525 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-201ENST00000355430 FBXO4Q9UKT5 387 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 EMC9Q9Y3B6 208 aa11.36□□□□□ -0.59
COLCA1-201ENST00000355430 TEX46H3BTG2 121 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 ALOX12BO75342 701 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 OR2T7P0C7T2 308 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 PNMTP11086 282 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 UBL4AP11441 157 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 HCCSP53701 268 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF620Q6ZNG0 422 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 STX12Q86Y82 276 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 RCBTB1Q8NDN9 531 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 OR6F1Q8NGZ6 308 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 OR2T27Q8NH04 317 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms