RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 HCFC2Q9Y5Z7 792 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 RANBP2P49792 3224 aaKnown RBP13.69□□□□□ -0.22
TRAF3-202ENST00000351691 UBE2CO00762 179 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 SLC25A12O75746 678 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 AKAIN1P0CW23 69 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 C5orf46Q6UWT4 87 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 ACOT7LQ6ZUV0 252 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 GRASPQ7Z6J2 395 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-202ENST00000351691 RANBP3LQ86VV4 465 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-202ENST00000351691 AMZ2Q86W34 360 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 C12orf40Q86WS4 652 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 C7orf61Q8IZ16 206 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 CDK20Q8IZL9 346 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 BEST3Q8N1M1 668 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 OR4C6Q8NH72 309 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 SPPL3Q8TCT6 385 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 RXFP4Q8TDU9 374 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 TFGQ92734 400 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-202ENST00000351691 WDR13Q9H1Z4 485 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 CCDC86Q9H6F5 360 aaKnown RBP13.69□□□□□ -0.22
TRAF3-202ENST00000351691 POT1Q9NUX5 634 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 CXXC1Q9P0U4 656 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-202ENST00000351691 DPP7Q9UHL4 492 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 SIGLEC7Q9Y286 467 aa13.69□□□□□ -0.22
TRAF3-202ENST00000351691 MUC22E2RYF6 1773 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-202ENST00000351691 TBC1D3EA0A087X179 549 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 IFNGP01579 166 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 ITGB2P05107 769 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 ABOP16442 354 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 CSF2RBP32927 897 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 BLOC1S1P78537 153 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 VWA2Q5GFL6 755 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 C11orf87Q6NUJ2 197 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 DND1Q8IYX4 353 aaKnown RBP13.68□□□□□ -0.22
TRAF3-202ENST00000351691 TMEM239Q8WW34 195 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF707Q96C28 371 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-202ENST00000351691 CNTNAP3BQ96NU0 1288 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 VRK1Q99986 396 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-202ENST00000351691 EGLN1Q9GZT9 426 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 MTHFD2LQ9H903 347 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-202ENST00000351691 TMEM100Q9NV29 134 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 CLDND1Q9NY35 253 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF281Q9Y2X9 895 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 MRPS23Q9Y3D9 190 aaKnown RBP13.68□□□□□ -0.22
TRAF3-202ENST00000351691 CEP290O15078 2479 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 RNF222A6NCQ9 220 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 C1QTNF3-AMACRE9PGA6 284 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 SCAMP1O15126 338 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 AGR2O95994 175 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 CD79AP11912 226 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 CTNNB1P35222 781 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 PTGFRP43088 359 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF136P52737 540 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 PDZK1IP1Q13113 114 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 CRMP1Q14194 572 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 H3F3CQ6NXT2 135 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 THSD4Q6ZMP0 1018 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 OR5M8Q8NGP6 311 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 OR5AR1Q8NGP9 310 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 ARL11Q969Q4 196 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 IL17FQ96PD4 163 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 CNN2Q99439 309 aaKnown RBP13.68□□□□□ -0.22
TRAF3-202ENST00000351691 TRMT61BQ9BVS5 477 aaKnown RBP13.68□□□□□ -0.22
TRAF3-202ENST00000351691 HDAC8Q9BY41 377 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 SLITRK2Q9H156 845 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 DEC1Q9P2X7 70 aa13.68□□□□□ -0.22
TRAF3-202ENST00000351691 C5orf52A6NGY3 159 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 OR5H14A6NHG9 310 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 PRRT4C9JH25 899 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 LYPD3O95274 346 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 NDUFS1P28331 727 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 METAP1P53582 386 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 SSTP61278 116 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 AGERQ15109 404 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 C4orf46Q504U0 113 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 TMEM35AQ53FP2 167 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 TCEAL5Q5H9L2 206 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 FAM109BQ6ICB4 259 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-202ENST00000351691 ARHGAP11AQ6P4F7 1023 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-202ENST00000351691 LRRTM4Q86VH4 590 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 SLC35F2Q8IXU6 374 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 NUP43Q8NFH3 380 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 OR5K2Q8NHB8 316 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 STOML3Q8TAV4 291 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 STK35Q8TDR2 534 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 ING5Q8WYH8 240 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 LRRC3BQ96PB8 259 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF471Q9BX82 626 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-202ENST00000351691 ACTRT3Q9BYD9 372 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 MOKQ9UQ07 419 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 MDC1Q14676 2089 aaKnown RBP13.67□□□□□ -0.22
TRAF3-202ENST00000351691 DUXAA6NLW8 204 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 CLEC3AO75596 197 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 ZIC2O95409 532 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-202ENST00000351691 THBS1P07996 1170 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF806P0C7X5 589 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 UBE2MP61081 183 aaKnown RBP13.67□□□□□ -0.22
TRAF3-202ENST00000351691 RPE65Q16518 533 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms