RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ZC3H10Q96K80 434 aaKnown RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 GFM1Q96RP9 751 aaKnown RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 MNTQ99583 582 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 TTYH2Q9BSA4 534 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 PTDSS2Q9BVG9 487 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 TTTY10Q9BZA0 68 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 PPIL3Q9H2H8 161 aaKnown RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 PPP1R3EQ9H7J1 279 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 TAS2R5Q9NYW4 299 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 C19orf25Q9UFG5 118 aaPredicted RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 MYO15AQ9UKN7 3530 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 TRAV1-2A0A0B4J238 106 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 A0A1W2PQ09 198 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 AGRPO00253 132 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 SNPHO15079 494 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 GPRIN2O60269 458 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 CER1O95813 267 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 CSF3P09919 207 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 EDNRAP25101 427 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 SUMO3P55854 103 aaPredicted RBP15.13■□□□□ 0.01
SAMM50-201ENST00000350028 ASAH1Q13510 395 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 RIN1Q13671 783 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 COL28A1Q2UY09 1125 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 MESTQ5EB52 335 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 IDNKQ5T6J7 187 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 PHF19Q5T6S3 580 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 SLC6A19Q695T7 634 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 TMEM205Q6UW68 189 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 MAML2Q8IZL2 1156 aaPredicted RBP15.13■□□□□ 0.01
SAMM50-201ENST00000350028 OR6S1Q8NH40 331 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 HAVCR2Q8TDQ0 301 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 PHYHIPQ92561 330 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 HGDQ93099 445 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 WDR77Q9BQA1 342 aaPredicted RBP15.13■□□□□ 0.01
SAMM50-201ENST00000350028 MARCH7Q9H992 704 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 SRA1Q9HD15 236 aaKnown RBP15.13■□□□□ 0.01
SAMM50-201ENST00000350028 INIPQ9NRY2 104 aa15.13■□□□□ 0.01
SAMM50-201ENST00000350028 TRBV2A0A0J9YWF9 115 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TRBV11-1A0A0K0K1C0 115 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 A0A1W2PRG6 482 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 ANKUB1A6NFN9 424 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TMEM221A6NGB7 291 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 M0R296 226 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 MAGEB4O15481 346 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-201ENST00000350028 ARL6IP5O75915 188 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TACSTD2P09758 323 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 IL11RAQ14626 422 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 ZNF684Q5T5D7 378 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 C1orf140Q5VVS0 124 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 C1QL3Q5VWW1 255 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 NR2C2APQ86WQ0 139 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 ZNF511Q8NB15 262 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 ST8SIA1Q92185 356 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TTC9Q92623 222 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 ADAD1Q96M93 576 aaKnown RBP15.12■□□□□ 0.01
SAMM50-201ENST00000350028 SNX18Q96RF0 628 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 UBL7Q96S82 380 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-201ENST00000350028 SPSB2Q99619 263 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 CRB3Q9BUF7 120 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 OCIAD1Q9NX40 245 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 FRYLO94915 3013 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 C4orf47A7E2U8 309 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 FAM171A2A8MVW0 826 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 OR2T1O43869 369 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TRIM3O75382 744 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-201ENST00000350028 ZFAND5O76080 213 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 DXOO77932 396 aaKnown RBP15.12■□□□□ 0.01
SAMM50-201ENST00000350028 AHSA1O95433 338 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 FBXW4P57775 412 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 MRPL28Q13084 256 aaKnown RBP15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TRA2AQ13595 282 aaKnown RBP eCLIP15.12■□□□□ 0.01
SAMM50-201ENST00000350028 FAM27D1Q5T7N8 215 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 EEF1A1P5Q5VTE0 462 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 UNQ9370/PRO34162Q6UXP9 181 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 C16orf47Q6ZP98 133 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-201ENST00000350028 C1orf210Q8IVY1 113 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TIGD4Q8IY51 512 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TMEM105Q8N8V8 129 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 RPS4Y2Q8TD47 263 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 CHAC2Q8WUX2 184 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 SLC25A36Q96CQ1 311 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TXNDC15Q96J42 360 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 TSSK2Q96PF2 358 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 MFRPQ9BY79 579 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 APMAPQ9HDC9 416 aa15.12■□□□□ 0.01
SAMM50-201ENST00000350028 ADAMTS9Q9P2N4 1935 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 FAM25AB3EWG3 89 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 FAM25CB3EWG5 89 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 FAM25GB3EWG6 89 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 MEN1O00255 615 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 UCHL1P09936 223 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 RAB3BP20337 219 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 APEX1P27695 318 aaKnown RBP15.11■□□□□ 0.01
SAMM50-201ENST00000350028 MRPL14Q6P1L8 145 aaKnown RBP15.11■□□□□ 0.01
SAMM50-201ENST00000350028 SFXN4Q6P4A7 337 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 LYPD4Q6UWN0 246 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 TRILQ7L0X0 811 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 CDC20BQ86Y33 519 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 RNF138Q8WVD3 245 aa15.11■□□□□ 0.01
SAMM50-201ENST00000350028 ACOXLQ9NUZ1 547 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms