RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ZNF630Q2M218 657 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-203ENST00000349748 PCGF3Q3KNV8 242 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 MESTQ5EB52 335 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 UBXN11Q5T124 520 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 NKAIN2Q5VXU1 208 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 GDF6Q6KF10 455 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-203ENST00000349748 LIN54Q6MZP7 749 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 OR10H4Q8NGA5 316 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 MALSU1Q96EH3 234 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 PCED1BQ96HM7 432 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 EXO5Q9H790 373 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 MED20Q9H944 212 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 FKRPQ9H9S5 495 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 MYOZ1Q9NP98 299 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-203ENST00000349748 TRIM36Q9NQ86 728 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 SAGE1Q9NXZ1 904 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 COMMD9Q9P000 198 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 TTC3P53804 2025 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 SEC14L6B5MCN3 397 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 ETHE1O95571 254 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 AK1P00568 194 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 SLC2A1P11166 492 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 PGAM2P15259 253 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 PTNP21246 168 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 SULT1A1P50225 295 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 MC1RQ01726 317 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 TNFAIP8L2Q6P589 184 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-203ENST00000349748 HIST2H3AQ71DI3 136 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 OLIG3Q7RTU3 272 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 TRAPPC5Q8IUR0 188 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 HIST3H2BBQ8N257 126 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 OR2A12Q8NGT7 310 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 GHSRQ92847 366 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 RFKQ969G6 155 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 FOXRED1Q96CU9 486 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-203ENST00000349748 PIK3IP1Q96FE7 263 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 KIRREL1Q96J84 757 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 ZNF350Q9GZX5 532 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 POFUT1Q9H488 388 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 ARL15Q9NXU5 204 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 SLC23A2Q9UGH3 650 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 A4GNTQ9UNA3 340 aa9.78□□□□□ -0.84
CAPN3-203ENST00000349748 GNG14A0A1W2PPG7 69 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 FAM86C2PA6NEL3 165 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 FAM157AC9JC47 383 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 HHLA1C9JL84 531 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 J3QLW9 94 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 PTGESO14684 152 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 PPP1R2P9O14990 202 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 SLC25A14O95258 325 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 ARAFP10398 606 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 LIPCP11150 499 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF19P17023 458 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 BMP7P18075 431 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 PRPH2P23942 346 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 KIR3DL2P43630 455 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 PCBP4P57723 403 aaKnown RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 GPNMBQ14956 572 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 ZNHIT3Q15649 155 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 EXOSC6Q5RKV6 272 aaKnown RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 COL13A1Q5TAT6 717 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 LINGO4Q6UY18 593 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 FAM83HQ6ZRV2 1179 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 ANKRD33Q7Z3H0 272 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 ANGPTL5Q86XS5 388 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 BAP18Q8IXM2 172 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 ACBD7Q8N6N7 88 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 INO80EQ8NBZ0 244 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 TEX101Q9BY14 249 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 APMAPQ9HDC9 416 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 GULP1Q9UBP9 304 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 VPS29Q9UBQ0 182 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 LPAR3Q9UBY5 353 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 EXOGQ9Y2C4 368 aaKnown RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 MRPS18CQ9Y3D5 142 aaKnown RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 Q9Y3F1 56 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 PRSS21Q9Y6M0 314 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 OR5H15A6NDH6 313 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 MGAT4DA6NG13 374 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 OR5H1A6NKK0 313 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 NUDT19A8MXV4 375 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 CD8AP01732 235 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 CD5P06127 495 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 MRPL3P09001 348 aaKnown RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 TMIGD3P0DMS9 266 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 KCNE1P15382 129 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 CDK2P24941 298 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 PNPLA4P41247 253 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 LPAR6P43657 344 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 TUSC3Q13454 348 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF235Q14590 738 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 CPOQ8IVL8 374 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 TOP6BLQ8N6T0 577 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 ACBD4Q8NC06 268 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 SCAMP5Q8TAC9 235 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 ZCCHC10Q8TBK6 192 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 OR8D1Q8WZ84 308 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 RAB8BQ92930 207 aa9.77□□□□□ -0.85
CAPN3-203ENST00000349748 DVL3Q92997 716 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-203ENST00000349748 RAB33BQ9H082 229 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms