RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 PRSS16Q9NQE7 514 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 VSX1Q9NZR4 365 aaPredicted RBP16.19■□□□□ 0.18
SPAST-202ENST00000345662 ENTPD2Q9Y5L3 495 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 A0A1B0GUH1 482 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 ITGB7P26010 798 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 SLC6A11P48066 632 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 TAS2R30P59541 319 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 CLLU1OSQ5K130 101 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 ACOT7LQ6ZUV0 252 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 GLIPR2Q9H4G4 154 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 WDR76Q9H967 626 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 RGPD2P0DJD1 1756 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 C17orf113A0A1B0GUU1 675 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 LGALS8O00214 317 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 GPR75O95800 540 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 IGFBP1P08833 259 aaPredicted RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 ZNF865P0CJ78 1059 aaPredicted RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 CDH26Q8IXH8 852 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 AMDHD1Q96NU7 426 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 TMEM59Q9BXS4 323 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 P2RY12Q9H244 342 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 DNAJC5Q9H3Z4 198 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 SLC23A1Q9UHI7 598 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 ZNF593O00488 134 aaPredicted RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 ZNF44P15621 663 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 UBE2IP63279 158 aaKnown RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 C1orf61Q13536 156 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 IAH1Q2TAA2 248 aaPredicted RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 SLC43A2Q8N370 569 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 FAM160A2Q8N612 972 aaPredicted RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 MS4A8Q9BY19 250 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 EXOSC3Q9NQT5 275 aaKnown RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 CBLCQ9ULV8 474 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 PRELID3BQ9Y3B1 194 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 MYO5AQ9Y4I1 1855 aaKnown RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 C17orf105B2RV13 164 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 KDM4EB2RXH2 506 aaPredicted RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 NAGAP17050 411 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 ZP3P21754 424 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 PHF19Q5T6S3 580 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 ZNF852Q6ZMS4 543 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 LMNTD1Q8N9Z9 388 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 OR13C9Q8NGT0 318 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 RBM24Q9BX46 236 aaKnown RBP16.18■□□□□ 0.18
SPAST-202ENST00000345662 TAF9BQ9HBM6 251 aa16.18■□□□□ 0.18
SPAST-202ENST00000345662 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■■■■ 27.9
SPAST-202ENST00000345662 GPR171O14626 319 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 SBK2P0C263 348 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 TPBGQ13641 420 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 RNF212Q495C1 297 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 PRSS36Q5K4E3 855 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 SLC35D2Q76EJ3 337 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 DPY19L4Q7Z388 723 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 TEAD3Q99594 435 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 SELENOIQ9C0D9 397 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 RGS11O94810 467 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 SYNGR4O95473 234 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 LGI1O95970 557 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 TACR3P29371 465 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 ZNF705AQ6ZN79 300 aaPredicted RBP16.17■□□□□ 0.18
SPAST-202ENST00000345662 PARS2Q7L3T8 475 aaKnown RBP16.17■□□□□ 0.18
SPAST-202ENST00000345662 VRK3Q8IV63 474 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 RELL2Q8NC24 303 aaPredicted RBP16.17■□□□□ 0.18
SPAST-202ENST00000345662 PDXPQ96GD0 296 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 BTF3L4Q96K17 158 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 PDCD1LG2Q9BQ51 273 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 LRIT2A6NDA9 550 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 SNRPGP15A8MWD9 76 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 H3BML4 177 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 SGK494L7N484 410 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 CCSO14618 274 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 EIF4EP06730 217 aaKnown RBP16.17■□□□□ 0.18
SPAST-202ENST00000345662 MMP2P08253 660 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 CD53P19397 219 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 SSTP61278 116 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 MRPS34P82930 218 aaKnown RBP16.17■□□□□ 0.18
SPAST-202ENST00000345662 ADGRE4PQ86SQ3 457 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 RDH10Q8IZV5 341 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 ZNF740Q8NDX6 193 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 NANPQ8TBE9 248 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 HRASLSQ9HDD0 168 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 KLK8O60259 260 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 CNN3Q15417 329 aaKnown RBP16.17■□□□□ 0.18
SPAST-202ENST00000345662 ZNF74Q16587 644 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 LFNGQ8NES3 379 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 PRR14Q9BWN1 585 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 HINT2Q9BX68 163 aa16.17■□□□□ 0.18
SPAST-202ENST00000345662 NSA2O95478 260 aaKnown RBP16.16■□□□□ 0.18
SPAST-202ENST00000345662 RPS18P62269 152 aaKnown RBP16.16■□□□□ 0.18
SPAST-202ENST00000345662 BDH1Q02338 343 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 ZNF266Q14584 549 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 OR7A5Q15622 319 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 RBMS3Q6XE24 437 aaKnown RBP16.16■□□□□ 0.18
SPAST-202ENST00000345662 DPY19L2P2Q6ZN68 376 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 IL17RCQ8NAC3 791 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 HSD17B11Q8NBQ5 300 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 KCNG3Q8TAE7 436 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 NCDNQ9UBB6 729 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 ARRDC5A6NEK1 342 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 NUDT21O43809 227 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms