RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 FAM122AQ96E09 287 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 RADILQ96JH8 1075 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 WDR77Q9BQA1 342 aaPredicted RBP11.69□□□□□ -0.54
CLK3-201ENST00000345005 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.69□□□□□ -0.54
CLK3-201ENST00000345005 H2AFY2Q9P0M6 372 aaPredicted RBP11.69□□□□□ -0.54
CLK3-201ENST00000345005 PCNX3Q9H6A9 2034 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 A0A087WUJ7 227 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 A0A1W2PQ72 361 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 LINC00862A6NCI5 91 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 ALG1L2C9J202 215 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 ERVH48-1M5A8F1 160 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 EIF4E2O60573 245 aaKnown RBP11.68□□□□□ -0.54
CLK3-201ENST00000345005 HPGDSO60760 199 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 F8A1P23610 371 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 SLC1A3P43003 542 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 RAG2P55895 527 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 DCAF12Q5T6F0 453 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 ZNF57Q68EA5 555 aaPredicted RBP11.68□□□□□ -0.54
CLK3-201ENST00000345005 PAQR6Q6TCH4 344 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 LUZP2Q86TE4 346 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 TPRA1Q86W33 373 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 ARIH2OSQ8N7S6 290 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 NLGN4YQ8NFZ3 816 aaPredicted RBP11.68□□□□□ -0.54
CLK3-201ENST00000345005 NEIL3Q8TAT5 605 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 ARSGQ96EG1 525 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 DCLRE1CQ96SD1 692 aaKnown RBP11.68□□□□□ -0.54
CLK3-201ENST00000345005 CDC6Q99741 560 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 ZPBPQ9BS86 351 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 MED28Q9H204 178 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 AKIRIN1Q9H9L7 192 aaPredicted RBP11.68□□□□□ -0.54
CLK3-201ENST00000345005 TMEM9BQ9NQ34 198 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 MEPEQ9NQ76 525 aaPredicted RBP11.68□□□□□ -0.54
CLK3-201ENST00000345005 C20orf141Q9NUB4 165 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 NLKQ9UBE8 527 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 GPR179Q6PRD1 2367 aa11.68□□□□□ -0.54
CLK3-201ENST00000345005 ITGA10O75578 1167 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 PPM1BO75688 479 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 CD63P08962 238 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 LIMS3P0CW19 117 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 LIMS4P0CW20 117 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 PNMTP11086 282 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 BMP7P18075 431 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 PTNP21246 168 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 RBMS1P29558 406 aaKnown RBP11.67□□□□□ -0.54
CLK3-201ENST00000345005 SLC6A1P30531 599 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 TGM4P49221 684 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 NHLH1Q02575 133 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 COL28A1Q2UY09 1125 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 CLEC12AQ5QGZ9 265 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 TRILQ7L0X0 811 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 MARCH9Q86YJ5 346 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 ZNF485Q8NCK3 441 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 OR2T33Q8NG76 320 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 OR52L1Q8NGH7 329 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 OR5H6Q8NGV6 325 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 FANK1Q8TC84 345 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 GIMAP1Q8WWP7 306 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 SAMD8Q96LT4 415 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 C7orf50Q9BRJ6 194 aaKnown RBP11.67□□□□□ -0.54
CLK3-201ENST00000345005 TBL1XR1Q9BZK7 514 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 ICAM5Q9UMF0 924 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 HSPB11Q9Y547 144 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 NPFFR2Q9Y5X5 522 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 TRBV11-1A0A0K0K1C0 115 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 A0A1B0GVI7 797 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 C12orf71A8MTZ7 269 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 GABRPO00591 440 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 ZFAND5O76080 213 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 SAGP10523 405 aaPredicted RBP11.67□□□□□ -0.54
CLK3-201ENST00000345005 C4BPBP20851 252 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 CCR4P51679 360 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 CDH11P55287 796 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 SLC26A5P58743 744 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 PGGHGQ32M88 737 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 KLHL12Q53G59 568 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 ZBTB37Q5TC79 503 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 SLC30A6Q6NXT4 461 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 FAM199XQ6PEV8 388 aaPredicted RBP11.67□□□□□ -0.54
CLK3-201ENST00000345005 BAIAP2L2Q6UXY1 529 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 GID4Q8IVV7 300 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 SLC43A2Q8N370 569 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 OR5M3Q8NGP4 307 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 OR4Q3Q8NH05 313 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 C3orf49Q96BT1 292 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 OR2M2Q96R28 347 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 CITED4Q96RK1 184 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 TM9SF2Q99805 663 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 EDEM2Q9BV94 578 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 BEX2Q9BXY8 128 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 SLC19A3Q9BZV2 496 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 ACTR6Q9GZN1 396 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 HDHD2Q9H0R4 259 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 OR52D1Q9H346 318 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 UBQLN3Q9H347 655 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 INPP5EQ9NRR6 644 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 CYSLTR2Q9NS75 346 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 MCUBQ9NWR8 336 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 EMC3Q9P0I2 261 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 LOXL2Q9Y4K0 774 aa11.67□□□□□ -0.54
CLK3-201ENST00000345005 LOC102723996A0A087X1L8 192 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms