RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 ILF3Q12906 894 aaKnown RBP eCLIP8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 ELAVL3Q14576 367 aaKnown RBP8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 CST6Q15828 149 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 TMEM220Q6QAJ8 160 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 CD300LDQ6UXZ3 194 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 DPPA4Q7L190 304 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 LRRC70Q7Z2Q7 622 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 KCNRGQ8N5I3 272 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 OR4A4PQ8NGN8 299 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 OR13C5Q8NGS8 318 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 BRIX1Q8TDN6 353 aaKnown RBP8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 FCAMRQ8WWV6 532 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 PHYHIPLQ96FC7 376 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 UTP23Q9BRU9 249 aaKnown RBP8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 FNDC11Q9BVV2 318 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 PLEKHA1Q9HB21 404 aa8.3□□□□□ -1.08
AC008543.1-201ENST00000344893 EDDM13A0A1B0GTR0 161 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 C1QTNF3-AMACRE9PGA6 284 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 CACNB4O00305 520 aaPredicted RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 SOCS6O14544 535 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 BCL2L11O43521 198 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 NME1P15531 152 aaKnown RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 COL9A1P20849 921 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 P2RY2P41231 377 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 NSG1P42857 185 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 HSD17B7P56937 341 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 MC1RQ01726 317 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 IRF8Q02556 426 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 MAPK14Q16539 360 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 GFOD2Q3B7J2 385 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 ACSM3Q53FZ2 586 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 TMEM196Q5HYL7 178 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 TNFAIP8L2Q6P589 184 aaPredicted RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 UNQ6494/PRO21346Q6UXR6 183 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 SLC36A1Q7Z2H8 476 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 CAMKMTQ7Z624 323 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 LRRC56Q8IYG6 542 aaPredicted RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 GTPBP8Q8N3Z3 284 aaPredicted RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 OR1J4Q8NGS1 313 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 OR4Q3Q8NH05 313 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 FAM3CQ92520 227 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 ZNF354BQ96LW1 612 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 PIGQQ9BRB3 760 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 SOX7Q9BT81 388 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 ALG8Q9BVK2 526 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 TSPAN10Q9H1Z9 355 aaPredicted RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 OR51I1Q9H343 314 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 TRIM36Q9NQ86 728 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 GFOD1Q9NXC2 390 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 ZNF230Q9UIE0 474 aaPredicted RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 A4GNTQ9UNA3 340 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 EXOGQ9Y2C4 368 aaKnown RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 FAM96BQ9Y3D0 163 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 CBY1Q9Y3M2 126 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 ASXL3Q9C0F0 2248 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 ANKRD20A5PA0PJZ0 165 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 BTBD17A6NE02 478 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 M0R3H8 397 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 TSPAN6O43657 245 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 CD22P20273 847 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 AVPR2P30518 371 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 AGTR1P30556 359 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 MAPK8P45983 427 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 SPINT3P49223 89 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 MECP2P51608 486 aaKnown RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 BDH1Q02338 343 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 ATXN7L3Q14CW9 347 aaPredicted RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 GAB4Q2WGN9 574 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 LRRC37A5PQ49AS3 106 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 AADACL4Q5VUY2 407 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 OLFML2AQ68BL7 652 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 KRT77Q7Z794 578 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 LRRTM4Q86VH4 590 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 TGIF2LXQ8IUE1 241 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 SLC38A5Q8WUX1 472 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 RAB3CQ96E17 227 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 MISP3Q96FF7 219 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 SPOCK3Q9BQ16 436 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 LAT2Q9GZY6 243 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 ACKR4Q9NPB9 350 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 H2AFY2Q9P0M6 372 aaPredicted RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 KCNK6Q9Y257 313 aa8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 AK6Q9Y3D8 172 aaKnown RBP8.29□□□□□ -1.08
AC008543.1-201ENST00000344893 CLDN4O14493 209 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 UQCRC2P22695 453 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 CERS1P27544 350 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 OR2B8PP59922 312 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 CXADRP78310 365 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 COL4A3Q01955 1670 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 NAE1Q13564 534 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 KRBOX4Q5JUW0 171 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 C1orf94Q6P1W5 598 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 UNQ6126/PRO20091Q6UXV3 157 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 ERN2Q76MJ5 926 aaKnown RBP8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 VRK3Q8IV63 474 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 ACBD7Q8N6N7 88 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 C17orf47Q8NEP4 570 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 HS6ST2Q96MM7 605 aa8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 BHLHE41Q9C0J9 482 aaPredicted RBP8.28□□□□□ -1.08
AC008543.1-201ENST00000344893 MRPS30Q9NP92 439 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms