RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 NUS1Q96E22 293 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 DTD2Q96FN9 168 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 APMAPQ9HDC9 416 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 NOP16Q9Y3C1 178 aaKnown RBP13.62□□□□□ -0.23
CLCN1-201ENST00000343257 MYO7AQ13402 2215 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 RPN2P04844 631 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 RPLP2P05387 115 aaKnown RBP13.62□□□□□ -0.23
CLCN1-201ENST00000343257 ANXA2P07355 339 aaKnown RBP13.62□□□□□ -0.23
CLCN1-201ENST00000343257 FAUP35544 74 aaKnown RBP13.62□□□□□ -0.23
CLCN1-201ENST00000343257 HTRA4P83105 476 aaPredicted RBP13.62□□□□□ -0.23
CLCN1-201ENST00000343257 SNTB1Q13884 538 aaKnown RBP13.62□□□□□ -0.23
CLCN1-201ENST00000343257 KRT33BQ14525 404 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF234Q14588 700 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 MLC1Q15049 377 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 JMJD6Q6NYC1 403 aaPredicted RBP13.62□□□□□ -0.23
CLCN1-201ENST00000343257 KRT77Q7Z794 578 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 AMZ2Q86W34 360 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 OR10AC1Q8NH08 325 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 SLC22A8Q8TCC7 542 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 DNAJA3Q96EY1 480 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 LMF1Q96S06 567 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 CALML5Q9NZT1 146 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 A0A1W2PPV9 198 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 EIF4E2O60573 245 aaKnown RBP13.61□□□□□ -0.23
CLCN1-201ENST00000343257 PAPLNO95428 1278 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 C6P13671 934 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 ATP1B3P54709 279 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 LY6G6FQ5SQ64 297 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 LY6G5CQ5SRR4 150 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 TPGS2Q68CL5 300 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 TMEFF1Q8IYR6 380 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 DND1Q8IYX4 353 aaKnown RBP13.61□□□□□ -0.23
CLCN1-201ENST00000343257 OR1J2Q8NGS2 313 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 TRIM43Q96BQ3 446 aaPredicted RBP13.61□□□□□ -0.23
CLCN1-201ENST00000343257 BCL2L14Q9BZR8 327 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 SLITRK2Q9H156 845 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 MTHFD2LQ9H903 347 aaPredicted RBP13.61□□□□□ -0.23
CLCN1-201ENST00000343257 CDV3Q9UKY7 258 aaKnown RBP13.61□□□□□ -0.23
CLCN1-201ENST00000343257 GLSO94925 669 aaPredicted RBP13.61□□□□□ -0.23
CLCN1-201ENST00000343257 ACTL6AO96019 429 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
CLCN1-201ENST00000343257 ITGB8P26012 769 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 NKPD1Q17RQ9 610 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 TRMT12Q53H54 448 aaKnown RBP13.61□□□□□ -0.23
CLCN1-201ENST00000343257 TMEM64Q6YI46 380 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 DEFB128Q7Z7B8 93 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 OR2L2Q8NH16 312 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 GLYATL2Q8WU03 294 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 RELTQ969Z4 430 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 PELI2Q9HAT8 420 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 COMMD9Q9P000 198 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 MKL2Q9ULH7 1088 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 TRAV8-7A0A075B6U6 113 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 IRF5Q13568 498 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 PON3Q15166 354 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 ETV3LQ6ZN32 361 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 SOCS4Q8WXH5 440 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 NR4A3Q92570 626 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 MIB2Q96AX9 1013 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 RASD2Q96D21 266 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 MS4A6EQ96DS6 147 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 IGSF21Q96ID5 467 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 FAM83CQ9BQN1 747 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 TRPV4Q9HBA0 871 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 HCFC1R1Q9NWW0 138 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 KCNE5Q9UJ90 142 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 GTF2A1LQ9UNN4 478 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF281Q9Y2X9 895 aa13.61□□□□□ -0.23
CLCN1-201ENST00000343257 TXNL1O43396 289 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 DNAJB6O75190 326 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 IFNGP01579 166 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 OR4E1P0C645 316 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 AQP2P41181 271 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 AVPI1Q5T686 147 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 SLC48A1Q6P1K1 146 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 RHOUQ7L0Q8 258 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 CCDC36Q8IYA8 594 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 ZSCAN1Q8NBB4 408 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 OR51A4Q8NGJ6 313 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 SFXN5Q8TD22 340 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 PRDM7Q9NQW5 492 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 GSN-AS1Q9NRJ2 163 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF629Q9UEG4 869 aaPredicted RBP13.6□□□□□ -0.23
CLCN1-201ENST00000343257 KCNK7Q9Y2U2 307 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 DENND4CQ5VZ89 1909 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF860A6NHJ4 632 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 TTLL8A6PVC2 850 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 EEF1E1-BLOC1S5C9J1V9 151 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 MCIDASD6RGH6 385 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 AGPAT2O15120 278 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 PCCBP05166 539 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 CAPZA1P52907 286 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 ARFIP1P53367 373 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 MFSD12Q6NUT3 480 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 ZCCHC10Q8TBK6 192 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 SP7Q8TDD2 431 aaPredicted RBP13.6□□□□□ -0.23
CLCN1-201ENST00000343257 CASTOR1Q8WTX7 329 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 SDF2Q99470 211 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 SPSB2Q99619 263 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 LGR4Q9BXB1 951 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms