RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZNF684Q5T5D7 378 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ZNF66Q6ZN08 573 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 LRP11Q86VZ4 500 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 BPIFB2Q8N4F0 458 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SNX22Q96L94 193 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TRAF4Q9BUZ4 470 aaPredicted RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 VCX2Q9H322 139 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SIRT7Q9NRC8 400 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 CAMK2AQ9UQM7 478 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 A0A1B0GV90 55 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 B4E171 279 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PRNPP04156 253 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TMEM225BP0DP42 221 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 RHOQP17081 205 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TACR1P25103 407 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 CSN1S1P47710 185 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 AAK1Q2M2I8 961 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ZNF761Q86XN6 746 aaPredicted RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 FUNDC1Q8IVP5 155 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR5L2Q8NGL0 311 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SCMH1Q96GD3 660 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 UBXN10Q96LJ8 280 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TSGA13Q96PP4 275 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR4C12Q96R67 309 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ATP5SQ99766 215 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 FTHL17Q9BXU8 183 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PARD6GQ9BYG4 376 aaPredicted RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 MAGEH1Q9H213 219 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SLC27A5Q9Y2P5 690 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 HIDE1A8MVS5 230 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 AIFM1O95831 613 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 FGF3P11487 239 aaPredicted RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 NDUFV1P49821 464 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ERVPABLB-1P60509 514 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SLC5A12Q1EHB4 618 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 CMTM4Q8IZR5 234 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 C11orf42Q8N5U0 333 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR10P1Q8NGE3 313 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 DDIT4LQ96D03 193 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ACO2Q99798 780 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 PTPN18Q99952 460 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 USB1Q9BQ65 265 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 METTL7AQ9H8H3 244 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PLCH1Q4KWH8 1693 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 A0A1B0GUH1 482 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TSPAN13O95857 204 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 AREGP15514 252 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 RABGGTBP53611 331 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 UBE2IP63279 158 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 PAQR3Q6TCH7 311 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 LGI3Q8N145 548 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 C10orf126Q8N4M7 172 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR6N1Q8NGY5 312 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR4A16Q8NH70 328 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 CREB3L4Q8TEY5 395 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PCNPQ8WW12 178 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR10A2Q9H208 303 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SLC6A20Q9NP91 592 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 MYOTQ9UBF9 498 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SLC6A14Q9UN76 642 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 BCL2L11O43521 198 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ALDOAP04075 364 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 HEXAP06865 529 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PMCHP20382 165 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SRP9P49458 86 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 GTF2A2P52657 109 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 STC1P52823 247 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TIGITQ495A1 244 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 KIAA0319Q5VV43 1072 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 C9orf131Q5VYM1 1079 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TMPRSS9Q7Z410 1059 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR51A7Q8NH64 312 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 FAM131CQ96AQ9 280 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 MCHR1Q99705 422 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 FDXACB1Q9BRP7 624 aaPredicted RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 MAP1LC3CQ9BXW4 147 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 GAL3ST2Q9H3Q3 398 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 GORASP2Q9H8Y8 452 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 HRASLSQ9HDD0 168 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TCRBV3S1A0A5B6 114 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR6C76A6NM76 312 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 BET1O15155 118 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 KLRC4O43908 158 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 F2RP25116 425 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TGFBR1P36897 503 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 GABRA4P48169 554 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 GSK3AP49840 483 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ACSM3Q53FZ2 586 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 C9orf152Q5JTZ5 239 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 C6orf136Q5SQH8 315 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 GLYATL3Q5SZD4 288 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SYT6Q5T7P8 510 aaPredicted RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 FDX2Q6P4F2 183 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 WDR88Q6ZMY6 472 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ADGRE4PQ86SQ3 457 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PIGZQ86VD9 579 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 BPIFA4PQ86YQ2 179 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 CLEC10AQ8IUN9 316 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ZNF321PQ8N8H1 164 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ZFP62Q8NB50 900 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms