RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TMEM221A6NGB7 291 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 P2RX6O15547 441 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 HOXB5P09067 269 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 RAB40ALP0C0E4 278 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 OR2T7P0C7T2 308 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 NOVA1P51513 510 aaKnown RBP13.86□□□□□ -0.19
UBE3B-202ENST00000342494 MLLT11Q13015 90 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-202ENST00000342494 C9orf152Q5JTZ5 239 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 YRDCQ86U90 279 aaKnown RBP13.86□□□□□ -0.19
UBE3B-202ENST00000342494 ABHD11Q8NFV4 315 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 OR4M1Q8NGD0 313 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 OR2T27Q8NH04 317 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 RAB40AQ8WXH6 277 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 ELP4Q96EB1 424 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 NEURL3Q96EH8 262 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 ELMOD3Q96FG2 381 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 OR2B2Q9GZK3 357 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 SOCS6O14544 535 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 HPGDSO60760 199 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 KCNK2O95069 426 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 KIR2DL3P43628 341 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 HOXA1P49639 335 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-202ENST00000342494 RPS23P62266 143 aaKnown RBP13.86□□□□□ -0.19
UBE3B-202ENST00000342494 ZNF529Q6P280 563 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 FCRLAQ7L513 359 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 C7orf50Q9BRJ6 194 aaKnown RBP13.86□□□□□ -0.19
UBE3B-202ENST00000342494 NOX4Q9NPH5 578 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 LANCL2Q9NS86 450 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 MRPS28Q9Y2Q9 187 aaKnown RBP13.86□□□□□ -0.19
UBE3B-202ENST00000342494 GLULP15104 373 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 PFN3P60673 137 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 FOXC1Q12948 553 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 TNK1Q13470 666 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 TBPL2Q6SJ96 375 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 BPIFB2Q8N4F0 458 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 C11orf40Q8WZ69 217 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 DAZAP1Q96EP5 407 aaKnown RBP13.86□□□□□ -0.19
UBE3B-202ENST00000342494 SMIM3Q9BZL3 60 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 ACOD1A6NK06 481 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 MYBPHQ13203 477 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 CLVS2Q5SYC1 327 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 OR2G6Q5TZ20 316 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 DPY19L2P2Q6ZN68 376 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 PGAP1Q75T13 922 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 GRINAQ7Z429 371 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 PATE1Q8WXA2 126 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 MRGPRX1Q96LB2 322 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 SELENOIQ9C0D9 397 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 IDH3GP51553 393 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-202ENST00000342494 KHDC1LQ5JSQ8 128 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 RSPO2Q6UXX9 243 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-202ENST00000342494 SPARTQ8N0X7 666 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 OR5M1Q8NGP8 315 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 OR2T11Q8NH01 316 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 RAB3CQ96E17 227 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 SGPP1Q9BX95 441 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 TCRBV3S1A0A5B6 114 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 SYT5O00445 386 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 EIF4E2O60573 245 aaKnown RBP13.85□□□□□ -0.19
UBE3B-202ENST00000342494 GRPP07492 148 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 HTD2P86397 168 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 C9orf50Q5SZB4 431 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 H1FNTQ75WM6 255 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-202ENST00000342494 SLC15A4Q8N697 577 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 CPEB3Q8NE35 698 aaKnown RBP13.85□□□□□ -0.19
UBE3B-202ENST00000342494 ZFP90Q8TF47 636 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 LIPHQ8WWY8 451 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 ARL11Q969Q4 196 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 C2CD4DB7Z1M9 353 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 DOK2O60496 412 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 TUSC2O75896 110 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 C21orf33P30042 268 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-202ENST00000342494 PAN3Q58A45 887 aaKnown RBP13.85□□□□□ -0.19
UBE3B-202ENST00000342494 B3GNT8Q7Z7M8 397 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 SLC16A11Q8NCK7 471 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 BBS1Q8NFJ9 593 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 KCNG3Q8TAE7 436 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 GGHQ92820 318 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 SARAFQ96BY9 339 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 P2RY10O00398 339 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 GABRPO00591 440 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 ZNF691Q5VV52 312 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 SLC46A3Q7Z3Q1 461 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 MAML2Q8IZL2 1156 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-202ENST00000342494 C12orf45Q8N5I9 185 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-202ENST00000342494 GJC3Q8NFK1 279 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 FRZBQ92765 325 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 TSSK2Q96PF2 358 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 NMNAT2Q9BZQ4 307 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 A4GALTQ9NPC4 353 aa13.85□□□□□ -0.19
UBE3B-202ENST00000342494 CD14P08571 375 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 GM2AP17900 193 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 HTR2CP28335 458 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 BLVRBP30043 206 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-202ENST00000342494 GDPD3Q7L5L3 318 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 LRRC28Q86X40 367 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-202ENST00000342494 OR4A16Q8NH70 328 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 SECTM1Q8WVN6 248 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 OR14A2Q96R54 314 aa13.84□□□□□ -0.19
UBE3B-202ENST00000342494 MFFQ9GZY8 342 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms