RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ZNF782Q6ZMW2 699 aaPredicted RBP13.26□□□□□ -0.29
TDP2-201ENST00000341060 LSM14AQ8ND56 463 aaKnown RBP13.26□□□□□ -0.29
TDP2-201ENST00000341060 OR7G1Q8NGA0 311 aa13.26□□□□□ -0.29
TDP2-201ENST00000341060 SLC25A38Q96DW6 304 aa13.26□□□□□ -0.29
TDP2-201ENST00000341060 ACTR6Q9GZN1 396 aa13.26□□□□□ -0.29
TDP2-201ENST00000341060 PLEKHA1Q9HB21 404 aa13.26□□□□□ -0.29
TDP2-201ENST00000341060 UCKL1Q9NWZ5 548 aa13.26□□□□□ -0.29
TDP2-201ENST00000341060 PTTG3PQ9NZH4 202 aa13.26□□□□□ -0.29
TDP2-201ENST00000341060 ZNF222Q9UK12 451 aa13.26□□□□□ -0.29
TDP2-201ENST00000341060 PLCL2Q9UPR0 1127 aa13.26□□□□□ -0.29
TDP2-201ENST00000341060 C4orf47A7E2U8 309 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 FAM171A2A8MVW0 826 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 CHURC1-FNTBB4DL54 471 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 H0YIG0 161 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 SCDO00767 359 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 OIP5O43482 229 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 IL33O95760 270 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 PROS1P07225 676 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 TACSTD2P09758 323 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 H2AFB2P0C5Z0 115 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 MST1P26927 711 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 UQCRC1P31930 480 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 NUDT1P36639 197 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 FNTBP49356 437 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 CCR4P51679 360 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 SLC37A1P57057 533 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 EGR4Q05215 589 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 BIKQ13323 160 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 FAM220AQ7Z4H9 259 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 FGD2Q7Z6J4 655 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 IZUMO1Q8IYV9 350 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 ZNF511Q8NB15 262 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 OR56B4Q8NH76 319 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 PHOSPHO1Q8TCT1 267 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 GIMAP1Q8WWP7 306 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 TSSK2Q96PF2 358 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 MRI1Q9BV20 369 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 UCK1Q9HA47 277 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 LIN7BQ9HAP6 207 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 AKAP7Q9P0M2 348 aaPredicted RBP13.25□□□□□ -0.29
TDP2-201ENST00000341060 GMEB2Q9UKD1 530 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 V9GY05 133 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 LILRA5A6NI73 299 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 ZNF264O43296 627 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 PRKNO60260 465 aaPredicted RBP13.25□□□□□ -0.29
TDP2-201ENST00000341060 ITGA10O75578 1167 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 TXNDC12O95881 172 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 CXCL3P19876 107 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 CD1CP29017 333 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 CTXN1P60606 82 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 TCTE1Q5JU00 501 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 FAM69AQ5T7M9 428 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 LINGO2Q7L985 606 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 ZNF687Q8N1G0 1237 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 C10orf53Q8N6V4 93 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 ZNF433Q8N7K0 673 aaPredicted RBP13.25□□□□□ -0.29
TDP2-201ENST00000341060 MAP6Q96JE9 813 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 TSPAN10Q9H1Z9 355 aaPredicted RBP13.25□□□□□ -0.29
TDP2-201ENST00000341060 RNF215Q9Y6U7 377 aa13.25□□□□□ -0.29
TDP2-201ENST00000341060 PCNX3Q9H6A9 2034 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 TMEM72A0PK05 275 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 GABARAPH6UMI1 98 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 ZNF593O00488 134 aaPredicted RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 UPK3AO75631 287 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 MAPK3P27361 379 aaPredicted RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 PPICP45877 212 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 Q499Y3 187 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 MTFR2Q6P444 385 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 APOOLQ6UXV4 268 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 Q6ZS52 159 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 NUP54Q7Z3B4 507 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 TIGD4Q8IY51 512 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 EID2Q8N6I1 236 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 FAM174AQ8TBP5 190 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 PTPMT1Q8WUK0 201 aaPredicted RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 HGDQ93099 445 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 GPR137Q96N19 417 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 LPAR4Q99677 370 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 C20orf85Q9H1P6 137 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 UBE2ZQ9H832 354 aaPredicted RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 SLC23A1Q9UHI7 598 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 MRM2Q9UI43 246 aaKnown RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 ZNF346Q9UL40 294 aaKnown RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 CPAMD8Q8IZJ3 1885 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 SEC16AO15027 2179 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 FITM1A5D6W6 292 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 DCTN6O00399 190 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 ABHD16AO95870 558 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 ECDO95905 644 aaPredicted RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 F13BP05160 661 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 SULT1A3P0DMM9 295 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 SULT1A4P0DMN0 295 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 MAGEB1P43366 347 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 RPL18Q07020 188 aaKnown RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 ALKBH1Q13686 389 aaKnown RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 ELOCQ15369 112 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 ST3GAL2Q16842 350 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 EMC4Q5J8M3 183 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms