RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 AMDHD2Q9Y303 409 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 FLNAP21333 2647 aaKnown RBP12.81□□□□□ -0.36
ERCC1-203ENST00000340192 CADP27708 2225 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 GMNCA6NCL1 334 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 SHISA9B4DS77 424 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 M0R1B8 84 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 KPNA4O00629 521 aaPredicted RBP12.8□□□□□ -0.36
ERCC1-203ENST00000340192 NME4O00746 187 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 PLPP3O14495 311 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 TRAF3IP2O43734 574 aaPredicted RBP12.8□□□□□ -0.36
ERCC1-203ENST00000340192 SNX3O60493 162 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 SHOX2O60902 331 aaPredicted RBP12.8□□□□□ -0.36
ERCC1-203ENST00000340192 SLC43A1O75387 559 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 OR1E2P47887 323 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 NUDT2P50583 147 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 SLC7A2P52569 658 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 ROR2Q01974 943 aaKnown RBP12.8□□□□□ -0.36
ERCC1-203ENST00000340192 LIPEQ05469 1076 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 PUDPQ08623 228 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 SPOCK1Q08629 439 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 C8orf82Q6P1X6 216 aaPredicted RBP12.8□□□□□ -0.36
ERCC1-203ENST00000340192 DEF8Q6ZN54 512 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 CPLX4Q7Z7G2 160 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 TMEM123Q8N131 208 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
ERCC1-203ENST00000340192 OR1K1Q8NGR3 316 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 PERPQ96FX8 193 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 BOD1Q96IK1 185 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 TPD52L3Q96J77 140 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 MPP4Q96JB8 637 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 OR2M2Q96R28 347 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 HOPXQ9BPY8 73 aaPredicted RBP12.8□□□□□ -0.36
ERCC1-203ENST00000340192 PRSS27Q9BQR3 290 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 ZNF426Q9BUY5 554 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 NSRP1Q9H0G5 558 aaKnown RBP12.8□□□□□ -0.36
ERCC1-203ENST00000340192 LAMP3Q9UQV4 416 aa12.8□□□□□ -0.36
ERCC1-203ENST00000340192 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 CH25HO95992 272 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 DANCRP0C864 163 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 AHCYP23526 432 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 PTAFRP25105 342 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 CD40P25942 277 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 CDH11P55287 796 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 TAS2R41P59536 307 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 PRPS1P60891 318 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 POU3F1Q03052 451 aaPredicted RBP12.79□□□□□ -0.36
ERCC1-203ENST00000340192 ZNF74Q16587 644 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 Q5PR19 223 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 C1QTNF12Q5T7M4 302 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 SHEQ5VZ18 495 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 HMBOX1Q6NT76 420 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 KLHL24Q6TFL4 600 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 HACD2Q6Y1H2 254 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 GPR137CQ8N3F9 429 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 OR5J2Q8NH18 312 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 SMAP2Q8WU79 429 aaPredicted RBP12.79□□□□□ -0.36
ERCC1-203ENST00000340192 CMTM5Q96DZ9 223 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 EMC6Q9BV81 110 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 SLC19A3Q9BZV2 496 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 CXorf56Q9H5V9 222 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 MGAT4BQ9UQ53 548 aa12.79□□□□□ -0.36
ERCC1-203ENST00000340192 MAGED1Q9Y5V3 778 aaPredicted RBP12.79□□□□□ -0.36
ERCC1-203ENST00000340192 HEATR1Q9H583 2144 aaKnown RBP12.79□□□□□ -0.36
ERCC1-203ENST00000340192 ARID1AO14497 2285 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 RPL36A-HNRNPH2H7BZ11 118 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 AKAP8O43823 692 aaKnown RBP12.78□□□□□ -0.36
ERCC1-203ENST00000340192 SERPINI2O75830 405 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 OR5F1O95221 314 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 WNT11O96014 354 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 SOD3P08294 240 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 ADORA3P0DMS8 318 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 PAX1P15863 534 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 PTH2RP49190 550 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 RPS4XP62701 263 aaKnown RBP12.78□□□□□ -0.36
ERCC1-203ENST00000340192 GNGT1P63211 74 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 SELENOWP63302 87 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 PIN1Q13526 163 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-203ENST00000340192 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 TBRG1Q3YBR2 411 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 CARD17Q5XLA6 110 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 ANKRD16Q6P6B7 361 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 SLC22A25Q6T423 547 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 NHLRC1Q6VVB1 395 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 PXKQ7Z7A4 578 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 NKAIN4Q8IVV8 208 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 LRRC17Q8N6Y2 441 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 PIK3C3Q8NEB9 887 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 ANKK1Q8NFD2 765 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 BCL2L2Q92843 193 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-203ENST00000340192 TXNDC15Q96J42 360 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 RADILQ96JH8 1075 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 GSX2Q9BZM3 304 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 POLR2J2Q9GZM3 115 aaKnown RBP12.78□□□□□ -0.36
ERCC1-203ENST00000340192 POLR2J3Q9H1A7 115 aaKnown RBP12.78□□□□□ -0.36
ERCC1-203ENST00000340192 ALG2Q9H553 416 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 FKRPQ9H9S5 495 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 CRLF2Q9HC73 371 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 GPR35Q9HC97 309 aa12.78□□□□□ -0.36
ERCC1-203ENST00000340192 MEPEQ9NQ76 525 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-203ENST00000340192 NANSQ9NR45 359 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms